RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 Q6ZSN1 163 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 PDZD4Q76G19 769 aaPredicted RBP5.17□□□□□ -1.58
CBX5-203ENST00000547872 GSPT2Q8IYD1 628 aaKnown RBP5.17□□□□□ -1.58
CBX5-203ENST00000547872 PPM1NQ8N819 430 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 BORCS6Q96GS4 357 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 FUBP3Q96I24 572 aaKnown RBP eCLIP5.17□□□□□ -1.58
CBX5-203ENST00000547872 FAXDC2Q96IV6 333 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 ASB2Q96Q27 587 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 SLC2A13Q96QE2 648 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 EPHX3Q9H6B9 360 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 ZCCHC17Q9NP64 241 aaKnown RBP5.17□□□□□ -1.58
CBX5-203ENST00000547872 DNM3Q9UQ16 869 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 HDAC5Q9UQL6 1122 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 MAP3K2Q9Y2U5 619 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 TSC22D4Q9Y3Q8 395 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 PCDHGA2Q9Y5H1 932 aa5.17□□□□□ -1.58
CBX5-203ENST00000547872 TCF20Q9UGU0 1960 aaKnown RBP5.16□□□□□ -1.58
CBX5-203ENST00000547872 PHIPQ8WWQ0 1821 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 HOXA3O43365 443 aaPredicted RBP5.16□□□□□ -1.58
CBX5-203ENST00000547872 STC2O76061 302 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 RBP3P10745 1247 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 GSPT1P15170 499 aaKnown RBP5.16□□□□□ -1.58
CBX5-203ENST00000547872 ZKSCAN1P17029 563 aaPredicted RBP5.16□□□□□ -1.58
CBX5-203ENST00000547872 CRHR1P34998 444 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 APBA1Q02410 837 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 NOMO1Q15155 1222 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 CCL14Q16627 93 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 MST1LQ2TV78 715 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 FAM214AQ32MH5 1076 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 BRDTQ58F21 947 aaPredicted RBP5.16□□□□□ -1.58
CBX5-203ENST00000547872 TREML2Q5T2D2 321 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 WDR78Q5VTH9 848 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 APBB1IPQ7Z5R6 666 aaPredicted RBP5.16□□□□□ -1.58
CBX5-203ENST00000547872 CCAR1Q8IX12 1150 aaKnown RBP5.16□□□□□ -1.58
CBX5-203ENST00000547872 ELOA2Q8IYF1 753 aaPredicted RBP5.16□□□□□ -1.58
CBX5-203ENST00000547872 MB21D1Q8N884 522 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 CCDC191Q8NCU4 936 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 MDM1Q8TC05 714 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 PLEKHF1Q96S99 279 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 LRFN3Q9BTN0 628 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 C1QTNF1Q9BXJ1 281 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 ASPSCR1Q9BZE9 553 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 ENKD1Q9H0I2 346 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 DMRT3Q9NQL9 472 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 CNNM1Q9NRU3 951 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 HYPKQ9NX55 129 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 SCOCQ9UIL1 159 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 GIT1Q9Y2X7 761 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 TESMINQ9Y4I5 508 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 ZHX2Q9Y6X8 837 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 PRUNE2Q8WUY3 3088 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 PLXNB2O15031 1838 aa5.16□□□□□ -1.58
CBX5-203ENST00000547872 DOCK1Q14185 1865 aa5.15□□□□□ -1.58
CBX5-203ENST00000547872 CUL9Q8IWT3 2517 aa5.15□□□□□ -1.58
CBX5-203ENST00000547872 ANKRD18BA2A2Z9 1011 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 FAM171A2A8MVW0 826 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 ENDOD1O94919 500 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 PTPN7P35236 360 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 MCAMP43121 646 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 SLC16A1P53985 500 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 MRPS5P82675 430 aaKnown RBP5.15□□□□□ -1.59
CBX5-203ENST00000547872 MRPL49Q13405 166 aaKnown RBP5.15□□□□□ -1.59
CBX5-203ENST00000547872 PCBP2Q15366 365 aaKnown RBP eCLIP5.15□□□□□ -1.59
CBX5-203ENST00000547872 TRIM60Q495X7 471 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 TMEM31Q5JXX7 168 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 SPDYAQ5MJ70 313 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 LCE1DQ5T752 114 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 RPUSD2Q8IZ73 545 aaKnown RBP5.15□□□□□ -1.59
CBX5-203ENST00000547872 ATXN2LQ8WWM7 1075 aaKnown RBP5.15□□□□□ -1.59
CBX5-203ENST00000547872 ST8SIA2Q92186 375 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 JADE3Q92613 823 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 TEKT1Q969V4 418 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 CEP89Q96ST8 783 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 CPPED1Q9BRF8 314 aaPredicted RBP5.15□□□□□ -1.59
CBX5-203ENST00000547872 PAGR1Q9BTK6 254 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 BCO1Q9HAY6 547 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 HECAQ9UBI9 543 aaPredicted RBP5.15□□□□□ -1.59
CBX5-203ENST00000547872 SAP30BPQ9UHR5 308 aaKnown RBP5.15□□□□□ -1.59
CBX5-203ENST00000547872 OGDHLQ9ULD0 1010 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 SPEF1Q9Y4P9 236 aa5.15□□□□□ -1.59
CBX5-203ENST00000547872 LRRC37A2A6NM11 1700 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 GRXCR1A8MXD5 290 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 NDUFS2O75306 463 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 DDX58O95786 925 aaKnown RBP5.14□□□□□ -1.59
CBX5-203ENST00000547872 IGKV5-2P06315 115 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 IL1R1P14778 569 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 ACRV1P26436 265 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 ZEB1P37275 1124 aaPredicted RBP5.14□□□□□ -1.59
CBX5-203ENST00000547872 MAN2A2P49641 1150 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 MMP14P50281 582 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 KRT85P78386 507 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 EXOSC10Q01780 885 aaKnown RBP5.14□□□□□ -1.59
CBX5-203ENST00000547872 NEXNQ0ZGT2 675 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 PICALMQ13492 652 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 CDSNQ15517 529 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 SPTY2D1Q68D10 685 aaPredicted RBP5.14□□□□□ -1.59
CBX5-203ENST00000547872 FAM83AQ86UY5 434 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 MDGA1Q8NFP4 955 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 OR7D4Q8NG98 312 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms