RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 N4BP2Q86UW6 1770 aaPredicted RBP3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 KCPQ6ZWJ8 1503 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 CCDC78A2IDD5 438 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 LCHNA4D1U4 455 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 MYMKA6NI61 221 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 FAM171A2A8MVW0 826 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 ADM5C9JUS6 153 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 ULK1O75385 1050 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 HAUS5O94927 633 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 ADCYAP1R1P41586 468 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 FPGSQ05932 587 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 ADRM1Q16186 407 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 CT83Q5H943 113 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 PLAC9Q5JTB6 97 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 AWAT2Q6E213 333 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 GIMAP6Q6P9H5 292 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 NIM1KQ8IY84 436 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 Q8NA96 180 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 TMEM125Q96AQ2 219 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 PBKQ96KB5 322 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 ALG8Q9BVK2 526 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 TARS2Q9BW92 718 aaKnown RBP3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 VPS33BQ9H267 617 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 PRDM12Q9H4Q4 367 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 MANSC1Q9H8J5 431 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 EMC7Q9NPA0 242 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 KLC4Q9NSK0 619 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 TUBA8Q9NY65 449 aaPredicted RBP3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 TFCP2L1Q9NZI6 479 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 DPP7Q9UHL4 492 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 PLAAQ9Y263 795 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 BRCA1P38398 1863 aaKnown RBP3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 CPDO75976 1380 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 ANKRD30BQ9BXX2 1392 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 PLEKHG2Q9H7P9 1386 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 LY75O60449 1722 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 KIF13BQ9NQT8 1826 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 ARFGEF1Q9Y6D6 1849 aa3.21□□□□□ -1.9
DEPDC4-204ENST00000547823 QRICH2Q9H0J4 1663 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 COL18A1P39060 1754 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 RGPD5Q99666 1765 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 CASP8AP2Q9UKL3 1982 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 KIAA1551Q9HCM1 1747 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 TLDC2A0PJX2 215 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 CDHR4A6H8M9 788 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 E7ENX8 843 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 GPR32O75388 356 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 PRSS23O95084 383 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 MMP13P45452 471 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 ANXA11P50995 505 aaKnown RBP3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 SESN3P58005 492 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 NOMO3P69849 1222 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 MAP2K1Q02750 393 aaPredicted RBP3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 CREMQ03060 361 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 TFF2Q03403 129 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 TAP2Q03519 686 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 ZNF844Q08AG5 666 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 HLXQ14774 488 aaPredicted RBP3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 NOMO1Q15155 1222 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 PCBP1Q15365 356 aaKnown RBP eCLIP3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 SEPT7Q16181 437 aaKnown RBP3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 PREPLQ4J6C6 727 aaPredicted RBP3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 NOMO2Q5JPE7 1267 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 DACT2Q5SW24 774 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 PXDC1Q5TGL8 231 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 CEP85Q6P2H3 762 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 CNNM4Q6P4Q7 775 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 ZNF782Q6ZMW2 699 aaPredicted RBP3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 COL23A1Q86Y22 540 aaPredicted RBP3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 RASAL3Q86YV0 1011 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 B3GALNT2Q8NCR0 500 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 TBC1D15Q8TC07 691 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 SNX19Q92543 992 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 HOXB13Q92826 284 aaPredicted RBP3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 EAF2Q96CJ1 260 aaPredicted RBP3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 MFSD3Q96ES6 412 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 MS4A5Q9H3V2 200 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 SLC23A1Q9UHI7 598 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 SCOCQ9UIL1 159 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 AJAP1Q9UKB5 411 aaPredicted RBP3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 ADAM21Q9UKJ8 722 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 NUP155O75694 1391 aa3.2□□□□□ -1.9
DEPDC4-204ENST00000547823 RPGRIP1LQ68CZ1 1315 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 USP6P35125 1406 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 YTHDC2Q9H6S0 1430 aaKnown RBP3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 ITSN1Q15811 1721 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 A0A087X0B3 334 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 WDR27A2RRH5 827 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 TARM1B6A8C7 271 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 PRR23D1E9PI22 279 aaPredicted RBP3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 PPP6CO00743 305 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 JTBO76095 146 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 TUBB4AP04350 444 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 CHRM2P08172 466 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 PRR23D2P0DMB1 279 aaPredicted RBP3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 FCER1AP12319 257 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 PIGFQ07326 219 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 SLFN5Q08AF3 891 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 DYRK1AQ13627 763 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms