RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 THEM5Q8N1Q8 247 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 SEPT8Q92599 483 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 SENP8Q96LD8 212 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 TWNKQ96RR1 684 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 KRT12Q99456 494 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 HNRNPABQ99729 332 aaKnown RBP14.18□□□□□ -0.14
PTCH1-215ENST00000547672 LRRC1Q9BTT6 524 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 PAK6Q9NQU5 681 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-215ENST00000547672 ST7Q9NRC1 585 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 OGDHLQ9ULD0 1010 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 UTP11Q9Y3A2 253 aaKnown RBP14.18□□□□□ -0.14
PTCH1-215ENST00000547672 GABRDO14764 452 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 FSCN2O14926 492 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 SART1O43290 800 aaKnown RBP14.17□□□□□ -0.14
PTCH1-215ENST00000547672 TRAPPC3O43617 180 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 ERBB2P04626 1255 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 PSMA2P25787 234 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 RNASE9P60153 205 aaKnown RBP14.17□□□□□ -0.14
PTCH1-215ENST00000547672 PTPN20Q4JDL3 420 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 SYDE1Q6ZW31 735 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-215ENST00000547672 XYLT1Q86Y38 959 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 SLC13A5Q86YT5 568 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-215ENST00000547672 RNF169Q8NCN4 708 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 GRK7Q8WTQ7 553 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 SLC35F5Q8WV83 523 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 ALG3Q92685 438 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 ZFP42Q96MM3 310 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 MCEEQ96PE7 176 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 FAM193BQ96PV7 902 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-215ENST00000547672 CNPY3Q9BT09 278 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 SLC4A5Q9BY07 1137 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 FAM129AQ9BZQ8 928 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 UBXN6Q9BZV1 441 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 TMEM51Q9NW97 253 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 CDH9Q9ULB4 789 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 EFR3BQ9Y2G0 817 aa14.17□□□□□ -0.14
PTCH1-215ENST00000547672 DCDC2CA8MYV0 355 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 C9IYK1 514 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 GOLGA8SH3BPF8 625 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 PPEF2O14830 753 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 TJP3O95049 919 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 TFRCP02786 760 aaKnown RBP14.16□□□□□ -0.14
PTCH1-215ENST00000547672 PDGFRBP09619 1106 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 PYGMP11217 842 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 PTPN1P18031 435 aaKnown RBP14.16□□□□□ -0.14
PTCH1-215ENST00000547672 SSTR3P32745 418 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-215ENST00000547672 PCK1P35558 622 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 SCNN1GP51170 649 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 SOX4Q06945 474 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-215ENST00000547672 NNTQ13423 1086 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 SMC1AQ14683 1233 aaKnown RBP14.16□□□□□ -0.14
PTCH1-215ENST00000547672 UPP1Q16831 310 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 PKDCCQ504Y2 493 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 EFHC1Q5JVL4 640 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 ZFYVE27Q5T4F4 411 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 PPP1R26Q5T8A7 1209 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-215ENST00000547672 OR6B2Q6IFH4 312 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 EMBQ6PCB8 327 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 ZNF598Q86UK7 904 aaKnown RBP14.16□□□□□ -0.14
PTCH1-215ENST00000547672 KLHL7Q8IXQ5 586 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 DNAJC5GQ8N7S2 189 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 B3GALNT2Q8NCR0 500 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 GSTCDQ8NEC7 633 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 UBA3Q8TBC4 463 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 KBTBD7Q8WVZ9 684 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 KRT35Q92764 455 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 BTBD6Q96KE9 485 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 TOX2Q96NM4 488 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 CPXM1Q96SM3 734 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 AP1M1Q9BXS5 423 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 FRMD8P1Q9BZ68 369 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-215ENST00000547672 RNF208Q9H0X6 261 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 UNC93B1Q9H1C4 597 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 FAM114A2Q9NRY5 505 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 TMEM161AQ9NX61 479 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 HMGXB4Q9UGU5 601 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 CHORDC1Q9UHD1 332 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-215ENST00000547672 L1RE1Q9UN81 338 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 USTQ9Y2C2 406 aa14.16□□□□□ -0.14
PTCH1-215ENST00000547672 NDC80O14777 642 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 XPO1O14980 1071 aaKnown RBP14.15□□□□□ -0.14
PTCH1-215ENST00000547672 SPTLC1O15269 473 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 RRP9O43818 475 aaKnown RBP14.15□□□□□ -0.14
PTCH1-215ENST00000547672 PHF2O75151 1096 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 HEXIM1O94992 359 aaKnown RBP14.15□□□□□ -0.14
PTCH1-215ENST00000547672 CYP11A1P05108 521 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 CCL5P13501 91 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 FNTAP49354 379 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 AARSP49588 968 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTCH1-215ENST00000547672 ZNF143P52747 638 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-215ENST00000547672 EPHB4P54760 987 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 DRG2P55039 364 aaKnown RBP14.15□□□□□ -0.14
PTCH1-215ENST00000547672 VSNL1P62760 191 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 SLC6A3Q01959 620 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 PLCB3Q01970 1234 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 PKN2Q16513 984 aaKnown RBP14.15□□□□□ -0.14
PTCH1-215ENST00000547672 CYP1B1Q16678 543 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 PTPROQ16827 1216 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 NOMO2Q5JPE7 1267 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 FAM102AQ5T9C2 384 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms