RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 KIAA2013Q8IYS2 634 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 CELF5Q8N6W0 485 aaKnown RBP14.31□□□□□ -0.12
CPSF6-204ENST00000547486 SPATA18Q8TC71 538 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 RUBCNQ92622 972 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 CHAMP1Q96JM3 812 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 GCNAQ96QF7 691 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 FAM83CQ9BQN1 747 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 CRTAC1Q9NQ79 661 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 C2orf42Q9NWW7 574 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 NME7Q9Y5B8 376 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 MIA3Q5JRA6 1907 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 PVALEFA0A1B0GWK0 134 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 TADA3O75528 432 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 PDGFRBP09619 1106 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 PDIA4P13667 645 aaKnown RBP14.3□□□□□ -0.12
CPSF6-204ENST00000547486 PSMC1P62191 440 aaKnown RBP14.3□□□□□ -0.12
CPSF6-204ENST00000547486 RPL10AP62906 217 aaKnown RBP14.3□□□□□ -0.12
CPSF6-204ENST00000547486 SATB1Q01826 763 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 CYP24A1Q07973 514 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 PSMD6Q15008 389 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 PON2Q15165 354 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 CFAP221Q4G0U5 840 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 Q6ZS52 159 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 RALGPS2Q86X27 583 aaPredicted RBP14.3□□□□□ -0.12
CPSF6-204ENST00000547486 SPATA2LQ8IUW3 424 aaPredicted RBP14.3□□□□□ -0.12
CPSF6-204ENST00000547486 CCDC127Q96BQ5 260 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 CHFRQ96EP1 664 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 MYRFLQ96LU7 910 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 SLC22A12Q96S37 553 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 CYP2S1Q96SQ9 504 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 MRPL45Q9BRJ2 306 aaKnown RBP14.3□□□□□ -0.12
CPSF6-204ENST00000547486 MAGEF1Q9HAY2 307 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 TDP1Q9NUW8 608 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 FAM13BQ9NYF5 915 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 SERTAD1Q9UHV2 236 aa14.3□□□□□ -0.12
CPSF6-204ENST00000547486 TICRRQ7Z2Z1 1910 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 EP300Q09472 2414 aaPredicted RBP14.29□□□□□ -0.12
CPSF6-204ENST00000547486 GVINP1Q7Z2Y8 2422 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 KLRC4O43908 158 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 TNNI1P19237 187 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 WARSP23381 471 aaKnown RBP14.29□□□□□ -0.12
CPSF6-204ENST00000547486 PCSK1P29120 753 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 AVPR1AP37288 418 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 ID4P47928 161 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 CXCL12P48061 93 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 SNRPFP62306 86 aaKnown RBP14.29□□□□□ -0.12
CPSF6-204ENST00000547486 PLCB2Q00722 1185 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 DMWDQ09019 674 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 BMT2Q1RMZ1 405 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 ITPRIPL2Q3MIP1 535 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 TRIM68Q6AZZ1 485 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 ATL3Q6DD88 541 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 SCN4BQ8IWT1 228 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 XXYLT1Q8NBI6 393 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 PLEKHO2Q8TD55 490 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 MRPS31Q92665 395 aaKnown RBP14.29□□□□□ -0.12
CPSF6-204ENST00000547486 TRMT2BQ96GJ1 504 aaKnown RBP14.29□□□□□ -0.12
CPSF6-204ENST00000547486 PAGE5Q96GU1 130 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 MSANTD3Q96H12 275 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 FUBP3Q96I24 572 aaKnown RBP eCLIP14.29□□□□□ -0.12
CPSF6-204ENST00000547486 MMS19Q96T76 1030 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 CGRRF1Q99675 332 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 SYT15Q9BQS2 421 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 EPC1Q9H2F5 836 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 HPS4Q9NQG7 708 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 THG1LQ9NWX6 298 aaKnown RBP14.29□□□□□ -0.12
CPSF6-204ENST00000547486 CFAP45Q9UL16 551 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 CDH9Q9ULB4 789 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 ZDHHC9Q9Y397 364 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 R3HCC1Q9Y3T6 440 aaKnown RBP14.29□□□□□ -0.12
CPSF6-204ENST00000547486 GPR179Q6PRD1 2367 aa14.29□□□□□ -0.12
CPSF6-204ENST00000547486 ACTN4O43707 911 aaKnown RBP14.28□□□□□ -0.12
CPSF6-204ENST00000547486 UBE4BO95155 1302 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 SLFN14P0C7P3 912 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 ARSAP15289 507 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 BDNFP23560 247 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 DDX6P26196 483 aaKnown RBP eCLIP14.28□□□□□ -0.12
CPSF6-204ENST00000547486 MAGEA11P43364 429 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 CASP4P49662 377 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 CCR3P51677 355 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 STK4Q13043 487 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 CCINQ13939 588 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 KNOP1Q1ED39 458 aaKnown RBP14.28□□□□□ -0.12
CPSF6-204ENST00000547486 C1orf228Q6PIY5 440 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 C12orf56Q8IXR9 622 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 SPEM1Q8N4L4 309 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 PATJQ8NI35 1801 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 MYLPFQ96A32 169 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 RMDN1Q96DB5 314 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 FNBP1Q96RU3 617 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 HINFPQ9BQA5 517 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 IER2Q9BTL4 223 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 FAM126AQ9BYI3 521 aaPredicted RBP14.28□□□□□ -0.12
CPSF6-204ENST00000547486 EBF3Q9H4W6 596 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 MAGEC2Q9UBF1 373 aaPredicted RBP14.28□□□□□ -0.12
CPSF6-204ENST00000547486 ZMYM5Q9UJ78 669 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 DMXL1Q9Y485 3027 aa14.28□□□□□ -0.12
CPSF6-204ENST00000547486 ZNF292O60281 2723 aa14.27□□□□□ -0.12
CPSF6-204ENST00000547486 A0A1B0GVL5 298 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 C2orf78A6NCI8 922 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms