RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 COQ4Q9Y3A0 265 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 DMXL1Q9Y485 3027 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 ANO9A1A5B4 782 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 F8W810 466 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 PIRO00625 290 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 TEX33O43247 280 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 AP5Z1O43299 807 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 CST3P01034 146 aaPredicted RBP12.91□□□□□ -0.34
HDAC7-226ENST00000547259 DCNP07585 359 aaKnown RBP12.91□□□□□ -0.34
HDAC7-226ENST00000547259 SP9P0CG40 484 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 ATICP31939 592 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 TAF6P49848 677 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 MYL6P60660 151 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 UPP1Q16831 310 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 SV2CQ496J9 727 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 WDR44Q5JSH3 913 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 PRSS55Q6UWB4 352 aaPredicted RBP12.91□□□□□ -0.34
HDAC7-226ENST00000547259 EHBP1Q8NDI1 1231 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 CXorf38Q8TB03 319 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 HASPINQ8TF76 798 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 SEMA4DQ92854 862 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 FGF13Q92913 245 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 SECISBP2LQ93073 1101 aaKnown RBP12.91□□□□□ -0.34
HDAC7-226ENST00000547259 HPDLQ96IR7 371 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 PI4K2AQ9BTU6 479 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 LSM14BQ9BX40 385 aaKnown RBP12.91□□□□□ -0.34
HDAC7-226ENST00000547259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.91□□□□□ -0.34
HDAC7-226ENST00000547259 GDE1Q9NZC3 331 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 DLGAP2Q9P1A6 1054 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 MRPS17Q9Y2R5 130 aaKnown RBP12.91□□□□□ -0.34
HDAC7-226ENST00000547259 NUB1Q9Y5A7 615 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 BACE2Q9Y5Z0 518 aa12.91□□□□□ -0.34
HDAC7-226ENST00000547259 VWA8A3KMH1 1905 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 SPTLC1O15269 473 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 LAMTOR5O43504 91 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 B3GAT3O94766 335 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 KIF4AO95239 1232 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 ASS1P00966 412 aaKnown RBP12.9□□□□□ -0.34
HDAC7-226ENST00000547259 NOP14P78316 857 aaKnown RBP12.9□□□□□ -0.34
HDAC7-226ENST00000547259 GPC5P78333 572 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 LRMPQ12912 555 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 PUM1Q14671 1186 aaKnown RBP eCLIP12.9□□□□□ -0.34
HDAC7-226ENST00000547259 NR1I3Q14994 352 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 SYCP1Q15431 976 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 MLF2Q15773 248 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-226ENST00000547259 SGSM1Q2NKQ1 1148 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 PABPC1LQ4VXU2 614 aaKnown RBP12.9□□□□□ -0.34
HDAC7-226ENST00000547259 SLC44A4Q53GD3 710 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 ZNF667Q5HYK9 610 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 SCARA3Q6AZY7 606 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 SPOPLQ6IQ16 392 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 TRIM65Q6PJ69 517 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 C3orf58Q8NDZ4 430 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 TAF4BQ92750 862 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 FGF14Q92915 247 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 NT5C1BQ96P26 610 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 ERGIC2Q96RQ1 377 aa12.9□□□□□ -0.34
HDAC7-226ENST00000547259 AVENQ9NQS1 362 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-226ENST00000547259 TPRP12270 2363 aaKnown RBP12.89□□□□□ -0.35
HDAC7-226ENST00000547259 A0A1W2PQC6 194 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 CCL16O15467 120 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 LRRN2O75325 713 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 STAU1O95793 577 aaKnown RBP12.89□□□□□ -0.35
HDAC7-226ENST00000547259 P4HA1P13674 534 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 SLC9A1P19634 815 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 FGFR3P22607 806 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 PON1P27169 355 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 ELF1P32519 619 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 OR1D2P34982 312 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 KLK7P49862 253 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 ZNF75DP51815 510 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 TNNC1P63316 161 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 KCNMA1Q12791 1236 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 PARM1Q6UWI2 310 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 DSTYKQ6XUX3 929 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 SCARA5Q6ZMJ2 495 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 NEK11Q8NG66 645 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 LMO3Q8TAP4 145 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 SLC7A14Q8TBB6 771 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 ELMO3Q96BJ8 720 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 DDX23Q9BUQ8 820 aaKnown RBP12.89□□□□□ -0.35
HDAC7-226ENST00000547259 XYLT2Q9H1B5 865 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 MTRRQ9UBK8 725 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 MRPS23Q9Y3D9 190 aaKnown RBP12.89□□□□□ -0.35
HDAC7-226ENST00000547259 PCDHGA2Q9Y5H1 932 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 R4GN57 208 aa12.89□□□□□ -0.35
HDAC7-226ENST00000547259 KPNA7A9QM74 516 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 ZNF197O14709 1029 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 ECI2O75521 394 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 LRG1P02750 347 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 PTPN2P17706 415 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 PAX3P23760 479 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 BRCC3P46736 316 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 LILRA4P59901 499 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 PPP2R5DQ14738 602 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 UBXN2BQ14CS0 331 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 WDR72Q3MJ13 1102 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 DGLUCYQ7Z3D6 616 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 ARHGEF19Q8IW93 802 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 PPM1KQ8N3J5 372 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms