RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 LMO2P25791 158 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 LHX1P48742 406 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 CASP4P49662 377 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 NLRP12P59046 1061 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 CLDN10P78369 228 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 MYL7Q01449 175 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 MYO1EQ12965 1108 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 UBXN2BQ14CS0 331 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 CFAP221Q4G0U5 840 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 SDHAF4Q5VUM1 108 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 ZNF852Q6ZMS4 543 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 C1orf210Q8IVY1 113 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 ADSSL1Q8N142 457 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 FAM200AQ8TCP9 573 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 IRF7Q92985 503 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 E2F7Q96AV8 911 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 SLC46A2Q9BY10 475 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 XYLT2Q9H1B5 865 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 GOLPH3LQ9H4A5 285 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 TASP1Q9H6P5 420 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 CRTAC1Q9NQ79 661 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 USP25Q9UHP3 1055 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 CEP250Q9BV73 2442 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 A0A1W2PQ27 194 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 A0A1W2PQ64 194 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 A0A1W2PQD8 194 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 ZNF263O14978 683 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 CHADO15335 359 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 PRPF40AO75400 957 aaKnown RBP11.04□□□□□ -0.64
BEST3-208ENST00000547208 NOL4O94818 638 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 STAU1O95793 577 aaKnown RBP11.04□□□□□ -0.64
BEST3-208ENST00000547208 MYL1P05976 194 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 SP9P0CG40 484 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 TNNI1P19237 187 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 WARSP23381 471 aaKnown RBP11.04□□□□□ -0.64
BEST3-208ENST00000547208 PCSK1P29120 753 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 CDC25CP30307 473 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 SYKP43405 635 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 RPS9P46781 194 aaKnown RBP11.04□□□□□ -0.64
BEST3-208ENST00000547208 MLLT6P55198 1093 aaPredicted RBP11.04□□□□□ -0.64
BEST3-208ENST00000547208 PSMC1P62191 440 aaKnown RBP11.04□□□□□ -0.64
BEST3-208ENST00000547208 PSMD2Q13200 908 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 DDR2Q16832 855 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 SLC9A9Q8IVB4 645 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 RIN3Q8TB24 985 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 GOLGA5Q8TBA6 731 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 RNF25Q96BH1 459 aaPredicted RBP11.04□□□□□ -0.64
BEST3-208ENST00000547208 TRMT2BQ96GJ1 504 aaKnown RBP11.04□□□□□ -0.64
BEST3-208ENST00000547208 FUBP3Q96I24 572 aaKnown RBP eCLIP11.04□□□□□ -0.64
BEST3-208ENST00000547208 MYRFLQ96LU7 910 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 FNBP1Q96RU3 617 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 SYT15Q9BQS2 421 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 MRPL45Q9BRJ2 306 aaKnown RBP11.04□□□□□ -0.64
BEST3-208ENST00000547208 BCO2Q9BYV7 579 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 SMG9Q9H0W8 520 aaKnown RBP11.04□□□□□ -0.64
BEST3-208ENST00000547208 EXOC1Q9NV70 894 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 OBP2AQ9NY56 170 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 PIAS3Q9Y6X2 628 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 EML5Q05BV3 1969 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 FRYLO94915 3013 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 ZNF292O60281 2723 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 GPR179Q6PRD1 2367 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 ATG2BQ96BY7 2078 aa11.04□□□□□ -0.64
BEST3-208ENST00000547208 TPRP12270 2363 aaKnown RBP11.03□□□□□ -0.64
BEST3-208ENST00000547208 SLC38A8A6NNN8 435 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 LRRIQ3A6PVS8 624 aaPredicted RBP11.03□□□□□ -0.64
BEST3-208ENST00000547208 PDXKO00764 312 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 EXOC3O60645 756 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 TACC1O75410 805 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 RHOBTB3O94955 611 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 RPN1P04843 607 aaKnown RBP11.03□□□□□ -0.64
BEST3-208ENST00000547208 CSH1P0DML2 217 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 CSH2P0DML3 217 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 MAGEA9P43362 315 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 MAGEA11P43364 429 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 ID4P47928 161 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 MYL6P60660 151 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 RPL10AP62906 217 aaKnown RBP11.03□□□□□ -0.64
BEST3-208ENST00000547208 DPYDQ12882 1025 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 ARHGAP15Q53QZ3 475 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 WDR44Q5JSH3 913 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 TDRD10Q5VZ19 366 aaKnown RBP11.03□□□□□ -0.64
BEST3-208ENST00000547208 KRBA2Q6ZNG9 492 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 CMTM8Q8IZV2 173 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 PARD3BQ8TEW8 1205 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 MYLPFQ96A32 169 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 RMDN1Q96DB5 314 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 ZFYVE19Q96K21 471 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 NELL2Q99435 816 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 SCAND2PQ9GZW5 306 aaPredicted RBP11.03□□□□□ -0.64
BEST3-208ENST00000547208 VRTNQ9H8Y1 702 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 GDPD2Q9HCC8 539 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 CDH9Q9ULB4 789 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 CCL26Q9Y258 94 aa11.03□□□□□ -0.64
BEST3-208ENST00000547208 ZFHX4Q86UP3 3567 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 SOBPA7XYQ1 873 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 MAN2B1O00754 1011 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 VNN1O95497 513 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 C4BPAP04003 597 aaKnown RBP11.02□□□□□ -0.65
BEST3-208ENST00000547208 NR3C1P04150 777 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms