RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 GLOD4Q9HC38 313 aa4.15□□□□□ -1.75
RAB3IP-209ENST00000547055 SARS2Q9NP81 518 aaKnown RBP4.15□□□□□ -1.75
RAB3IP-209ENST00000547055 PCDH12Q9NPG4 1184 aa4.15□□□□□ -1.75
RAB3IP-209ENST00000547055 DUSP22Q9NRW4 184 aa4.15□□□□□ -1.75
RAB3IP-209ENST00000547055 HOMER2Q9NSB8 354 aa4.15□□□□□ -1.75
RAB3IP-209ENST00000547055 PCDHA6Q9UN73 950 aa4.15□□□□□ -1.75
RAB3IP-209ENST00000547055 SH2B3Q9UQQ2 575 aa4.15□□□□□ -1.75
RAB3IP-209ENST00000547055 COL4A3BPQ9Y5P4 624 aa4.15□□□□□ -1.75
RAB3IP-209ENST00000547055 PRRT4C9JH25 899 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 PPP6CO00743 305 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 TP73O15350 636 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 GRPP07492 148 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 AKAP5P24588 427 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 PPIFP30405 207 aaKnown RBP4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 PTGER1P34995 402 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 E2F2Q14209 437 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 ETFDHQ16134 617 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 CEP78Q5JTW2 689 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 RGS7BPQ6MZT1 257 aaPredicted RBP4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 SLC18B1Q6NT16 456 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 NAPRTQ6XQN6 538 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 PARS2Q7L3T8 475 aaKnown RBP4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 Q8N9P0 234 aaPredicted RBP4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 ATG4AQ8WYN0 398 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 GLG1Q92896 1179 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 RPL36ALQ969Q0 106 aaKnown RBP4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 CHMP4CQ96CF2 233 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 MTFMTQ96DP5 389 aaKnown RBP4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 MVB12AQ96EY5 273 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 CDK5RAP3Q96JB5 506 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 MOGAT1Q96PD6 335 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 SH2D3AQ9BRG2 576 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 BHMT2Q9H2M3 363 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 CCNL1Q9UK58 526 aaPredicted RBP4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 SSX2IPQ9Y2D8 614 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 BTBD3Q9Y2F9 522 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 PLEKHM1Q9Y4G2 1056 aa4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 SETD1BQ9UPS6 1966 aaKnown RBP4.14□□□□□ -1.75
RAB3IP-209ENST00000547055 TUBB4AP04350 444 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 NPSP0C0P6 89 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 VCAM1P19320 739 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 CYP4F2P78329 520 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 SATB1Q01826 763 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 SUPT20HL1Q3ZLR7 823 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 BRDTQ58F21 947 aaPredicted RBP4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 MORN5Q5VZ52 161 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 C11orf87Q6NUJ2 197 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 PNLDC1Q8NA58 520 aaKnown RBP4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 ZCRB1Q8TBF4 217 aaKnown RBP4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 XAGE5Q8WWM1 108 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 R3HDM4Q96D70 268 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 MAP3K14Q99558 947 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 QTRT1Q9BXR0 403 aaKnown RBP4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 ARMT1Q9H993 441 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 NDRG4Q9ULP0 352 aaKnown RBP4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 ADAMTS5Q9UNA0 930 aa4.13□□□□□ -1.75
RAB3IP-209ENST00000547055 KAT6AQ92794 2004 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 A1L4Q6 167 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 PROB1E7EW31 1015 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 ALDH2P05091 517 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 VIPR2P41587 438 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 HOXA4Q00056 320 aaPredicted RBP4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 SLC9A4Q6AI14 798 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 GRAMD1CQ8IYS0 662 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 CELF5Q8N6W0 485 aaKnown RBP4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 RP9Q8TA86 221 aaKnown RBP4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 CYP2W1Q8TAV3 490 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 DENND1AQ8TEH3 1009 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 NUP88Q99567 741 aaPredicted RBP4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 MACROD1Q9BQ69 325 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 FSD1LQ9BXM9 530 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 CNNM1Q9NRU3 951 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 XPR1Q9UBH6 696 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 IP6K2Q9UHH9 426 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 CPA4Q9UI42 421 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 SHOC2Q9UQ13 582 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 STXBP5LQ9Y2K9 1186 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 ZNF521Q96K83 1311 aa4.12□□□□□ -1.75
RAB3IP-209ENST00000547055 hCG_1984214I3L0E3 225 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 MYO1FO00160 1098 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 BMP15O95972 392 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 GPSM2P81274 684 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 GTF2H3Q13889 308 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 TBC1D25Q3MII6 688 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 DEPDC1Q5TB30 811 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 SLC2A7Q6PXP3 512 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 TRIM72Q6ZMU5 477 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 CHSY1Q86X52 802 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 C9orf106Q8NAJ2 232 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 HPS3Q969F9 1004 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 FCRL4Q96PJ5 515 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 CGRRF1Q99675 332 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 TCF7L1Q9HCS4 588 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 ANKRD6Q9Y2G4 727 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 TBC1D30Q9Y2I9 924 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 MRPS17Q9Y2R5 130 aaKnown RBP4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 TMX2Q9Y320 296 aa4.11□□□□□ -1.75
RAB3IP-209ENST00000547055 LOC105371045A0A1W2PR82 267 aa4.1□□□□□ -1.75
RAB3IP-209ENST00000547055 MYO1CO00159 1063 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms