RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 NUBP1P53384 320 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 FKBP3Q00688 224 aaKnown RBP16.97■□□□□ 0.31
DDX54-204ENST00000546898 CCDC142Q17RM4 750 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 TANGO2Q6ICL3 276 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 SIX5Q8N196 739 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 ST13P5Q8NFI4 369 aaPredicted RBP16.97■□□□□ 0.31
DDX54-204ENST00000546898 ZSCAN18Q8TBC5 510 aaPredicted RBP16.97■□□□□ 0.31
DDX54-204ENST00000546898 MYCBPAPQ8TBZ2 947 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 GIPC2Q8TF65 315 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 DEPDC1BQ8WUY9 529 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 TRMT2BQ96GJ1 504 aaKnown RBP16.97■□□□□ 0.31
DDX54-204ENST00000546898 DHTKD1Q96HY7 919 aaPredicted RBP16.97■□□□□ 0.31
DDX54-204ENST00000546898 PRRX2Q99811 253 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 ATXN3LQ9H3M9 355 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 IL21Q9HBE4 155 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 TMEM8AQ9HCN3 771 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 ARHGEF3Q9NR81 526 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 UXTQ9UBK9 157 aaPredicted RBP16.97■□□□□ 0.31
DDX54-204ENST00000546898 TICRRQ7Z2Z1 1910 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 ATP2C2O75185 946 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 NOL4O94818 638 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 PDGFRBP09619 1106 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 HMGA1P17096 107 aaKnown RBP16.96■□□□□ 0.31
DDX54-204ENST00000546898 WEE1P30291 646 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 GCLMP48507 274 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 CLCN5P51795 746 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 GPC5P78333 572 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 PPP3CAQ08209 521 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 KRT39Q6A163 491 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 FOXR2Q6PJQ5 311 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 PCED1BQ96HM7 432 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 ZSWIM3Q96MP5 696 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 SMYD3Q9H7B4 428 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 NME7Q9Y5B8 376 aa16.96■□□□□ 0.31
DDX54-204ENST00000546898 KRBA1A5PL33 1030 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 SOBPA7XYQ1 873 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 PTPN1P18031 435 aaKnown RBP16.95■□□□□ 0.3
DDX54-204ENST00000546898 DDX6P26196 483 aaKnown RBP eCLIP16.95■□□□□ 0.3
DDX54-204ENST00000546898 AVPR2P30518 371 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 GPR15P49685 360 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 MXI1P50539 228 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 VCPP55072 806 aaKnown RBP16.95■□□□□ 0.3
DDX54-204ENST00000546898 CYP27A1Q02318 531 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 MORC3Q14149 939 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 DDR2Q16832 855 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 MDH1BQ5I0G3 518 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 GPR158Q5T848 1215 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 CWF19L1Q69YN2 538 aaKnown RBP16.95■□□□□ 0.3
DDX54-204ENST00000546898 ANKRD40Q6AI12 368 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 ASTLQ6HA08 431 aaPredicted RBP16.95■□□□□ 0.3
DDX54-204ENST00000546898 SCARA5Q6ZMJ2 495 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 SCN4BQ8IWT1 228 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 B3GALNT2Q8NCR0 500 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 CCDC150Q8NCX0 1101 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 FLCNQ8NFG4 579 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 DNASE1L2Q92874 299 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 TNIP3Q96KP6 325 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 SPATA17Q96L03 361 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 MYRFLQ96LU7 910 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 PLA2G2FQ9BZM2 168 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 ELOVL4Q9GZR5 314 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 TASP1Q9H6P5 420 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 CA14Q9ULX7 337 aa16.95■□□□□ 0.3
DDX54-204ENST00000546898 HELZP42694 1942 aaKnown RBP16.95■□□□□ 0.3
DDX54-204ENST00000546898 PATJQ8NI35 1801 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 TRIM49BA6NDI0 452 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 SLC38A8A6NNN8 435 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 TRIM66O15016 1216 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 NPR3P17342 541 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 PSMC3P17980 439 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 AOC1P19801 751 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 ANXA13P27216 316 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 ASPAP45381 313 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 RAP1GAPP47736 663 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 PMS1P54277 932 aaKnown RBP16.94■□□□□ 0.3
DDX54-204ENST00000546898 NOP14P78316 857 aaKnown RBP16.94■□□□□ 0.3
DDX54-204ENST00000546898 CYP4F8P98187 520 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 PRKCQQ04759 706 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 STXBP5Q5T5C0 1151 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 PHLDB3Q6NSJ2 640 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 UNC93AQ86WB7 457 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 TRIML1Q8N9V2 468 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 TAS1R2Q8TE23 839 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 FAXDC2Q96IV6 333 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 SHDQ96IW2 340 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 DPEP3Q9H4B8 488 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 MMRN2Q9H8L6 949 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 OBP2AQ9NY56 170 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 EHD2Q9NZN4 543 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 MAGED2Q9UNF1 606 aaPredicted RBP16.94■□□□□ 0.3
DDX54-204ENST00000546898 ATP8B3O60423 1300 aa16.94■□□□□ 0.3
DDX54-204ENST00000546898 BICDL2A1A5D9 508 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 F11P03951 625 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 CD44P16070 742 aaKnown RBP16.93■□□□□ 0.3
DDX54-204ENST00000546898 TRIM21P19474 475 aaKnown RBP16.93■□□□□ 0.3
DDX54-204ENST00000546898 RFX1P22670 979 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 BDNFP23560 247 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 GRIK1P39086 918 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 CDH8P55286 799 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 NLRP12P59046 1061 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms