RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 IVNS1ABPQ9Y6Y0 642 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 LYPLA2O95372 231 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 ENO1P06733 434 aaKnown RBP14.89□□□□□ -0.03
SRP54-202ENST00000546080 DHRS4L1P0CG22 281 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 RPL7AP62424 266 aaKnown RBP14.89□□□□□ -0.03
SRP54-202ENST00000546080 TRMT5Q32P41 509 aaKnown RBP14.89□□□□□ -0.03
SRP54-202ENST00000546080 ANKRD22Q5VYY1 191 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 SLC39A4Q6P5W5 647 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 SCUBE1Q8IWY4 988 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 SMC1BQ8NDV3 1235 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 AZIN2Q96A70 460 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 DTNBP1Q96EV8 351 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 ECSITQ9BQ95 431 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 FAM213AQ9BRX8 229 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 CCDC28BQ9BUN5 200 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 TMX4Q9H1E5 349 aaPredicted RBP14.89□□□□□ -0.03
SRP54-202ENST00000546080 VCX3BQ9H321 246 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 VCX3AQ9NNX9 186 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 POLIQ9UNA4 740 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 PCDHB4Q9Y5E5 795 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 SNCAIPQ9Y6H5 919 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 IKBKGQ9Y6K9 419 aa14.89□□□□□ -0.03
SRP54-202ENST00000546080 FAM237BA0A1B0GVD1 139 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 DHX15O43143 795 aaKnown RBP14.88□□□□□ -0.03
SRP54-202ENST00000546080 ETV4P43268 484 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 PTK7Q13308 1070 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 CNPY1Q3B7I2 92 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 XKR9Q5GH70 373 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 PLA2G4FQ68DD2 849 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 LMBRD2Q68DH5 695 aaPredicted RBP14.88□□□□□ -0.03
SRP54-202ENST00000546080 CIAPIN1Q6FI81 312 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 PPP1R2P3Q6NXS1 205 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 RIPOR1Q6ZS17 1223 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 CPT1BQ92523 772 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 ACSF2Q96CM8 615 aaPredicted RBP14.88□□□□□ -0.03
SRP54-202ENST00000546080 TUBGCP5Q96RT8 1024 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 CENPKQ9BS16 269 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 STRIP2Q9ULQ0 834 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 BAG2O95816 211 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 IL1BP01584 269 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 PTPN7P35236 360 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 SPP2Q13103 211 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 UGCGQ16739 394 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 BBS9Q3SYG4 887 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 LRRC38Q5VT99 294 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 SPOPLQ6IQ16 392 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 TMEM270Q6UE05 265 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 NAT8LQ8N9F0 302 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 RBM15BQ8NDT2 890 aaKnown RBP14.88□□□□□ -0.03
SRP54-202ENST00000546080 FNBP1Q96RU3 617 aa14.88□□□□□ -0.03
SRP54-202ENST00000546080 WDR83Q9BRX9 315 aaKnown RBP14.88□□□□□ -0.03
SRP54-202ENST00000546080 ASTN2O75129 1339 aaPredicted RBP14.87□□□□□ -0.03
SRP54-202ENST00000546080 HNRNPDLO14979 420 aaKnown RBP14.87□□□□□ -0.03
SRP54-202ENST00000546080 HLA-DRAP01903 254 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 CRABP2P29373 138 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 MTM1Q13496 603 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 LRRC23Q53EV4 343 aaPredicted RBP14.87□□□□□ -0.03
SRP54-202ENST00000546080 MDH1BQ5I0G3 518 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 C15orf39Q6ZRI6 1047 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 MYLK4Q86YV6 388 aaPredicted RBP14.87□□□□□ -0.03
SRP54-202ENST00000546080 SLC35B2Q8TB61 432 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 ZNF516Q92618 1163 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 SERAC1Q96JX3 654 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 PANX3Q96QZ0 392 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 CYTH2Q99418 400 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 TTC1Q99614 292 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 SPATA16Q9BXB7 569 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 AGO4Q9HCK5 861 aaKnown RBP14.87□□□□□ -0.03
SRP54-202ENST00000546080 IRAK4Q9NWZ3 460 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 DDX56Q9NY93 547 aaKnown RBP14.87□□□□□ -0.03
SRP54-202ENST00000546080 IL1RAPL1Q9NZN1 696 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 PPARGC1AQ9UBK2 798 aaKnown RBP14.87□□□□□ -0.03
SRP54-202ENST00000546080 DNAJB4Q9UDY4 337 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 SYNPO2Q9UMS6 1093 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 TMEM191CA6NGB0 347 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 E7ESA3 106 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 SPECC1L-ADORA2AF8WAN1 911 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 I3L4J1 428 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 TM7SF2O76062 418 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 INHBAP08476 426 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 TMEM191BP0C7N4 346 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 PYGBP11216 843 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 TNNI1P19237 187 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 ACO1P21399 889 aaKnown RBP14.87□□□□□ -0.03
SRP54-202ENST00000546080 PSMC4P43686 418 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 ERFP50548 548 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 RTP1P59025 263 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 PSMC5P62195 406 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 ENPEPQ07075 957 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 CUL2Q13617 745 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 DNAL1Q4LDG9 190 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 C4orf19Q8IY42 314 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 PDIK1LQ8N165 341 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 TAB3Q8N5C8 712 aaPredicted RBP14.87□□□□□ -0.03
SRP54-202ENST00000546080 CHURC1Q8WUH1 139 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 MCEEQ96PE7 176 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 IQCGQ9H095 443 aaKnown RBP14.87□□□□□ -0.03
SRP54-202ENST00000546080 KCNK4Q9NYG8 393 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 TCEAL9Q9UHQ7 104 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms