RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ATP8B3O60423 1300 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 A0A1W2PRU2 124 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 STK25O00506 426 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 DPYSL4O14531 572 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 MOSPD3O75425 235 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 SOAT2O75908 522 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 AKAP3O75969 853 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 PSMC3P17980 439 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 AOC1P19801 751 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 ANXA13P27216 316 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 PIK3CAP42336 1068 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 PRCPP42785 496 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 PDE6CP51160 858 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 MCCD1P59942 119 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-216ENST00000544989 UBE2HP62256 183 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 GPC5P78333 572 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 FKBP3Q00688 224 aaKnown RBP12.61□□□□□ -0.39
HDAC4-216ENST00000544989 TANGO2Q6ICL3 276 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 C1orf228Q6PIY5 440 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 GAREM2Q75VX8 874 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 FLCNQ8NFG4 579 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 PLEKHO2Q8TD55 490 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 DHTKD1Q96HY7 919 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-216ENST00000544989 SPATA17Q96L03 361 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 LPIN3Q9BQK8 851 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 FAM124BQ9H5Z6 455 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-216ENST00000544989 TASP1Q9H6P5 420 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 TRPV5Q9NQA5 729 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 TMLHEQ9NVH6 421 aa12.61□□□□□ -0.39
HDAC4-216ENST00000544989 EPG5Q9HCE0 2579 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 KMT2EQ8IZD2 1858 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 MYBPHLA2RUH7 354 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 A8MXQ7 604 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 NOL4O94818 638 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 PDGFRBP09619 1106 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 GLULP15104 373 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 PTPN1P18031 435 aaKnown RBP12.6□□□□□ -0.39
HDAC4-216ENST00000544989 FCARP24071 287 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 CYP2F1P24903 491 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 LMO2P25791 158 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 MAGEA9P43362 315 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 STARD6P59095 220 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 MLF2Q15773 248 aaPredicted RBP12.6□□□□□ -0.39
HDAC4-216ENST00000544989 GPR158Q5T848 1215 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 KRT39Q6A163 491 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 FOXR2Q6PJQ5 311 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 SV2AQ7L0J3 742 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 UNC93AQ86WB7 457 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 MFSD6LQ8IWD5 586 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 YAF2Q8IY57 180 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 ADSSL1Q8N142 457 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 TTC39CQ8N584 583 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 GIPC2Q8TF65 315 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 MRPS31Q92665 395 aaKnown RBP12.6□□□□□ -0.39
HDAC4-216ENST00000544989 MYLPFQ96A32 169 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 MSANTD3Q96H12 275 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 MYRFLQ96LU7 910 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 NELL2Q99435 816 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 PHOX2BQ99453 314 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 MRPL45Q9BRJ2 306 aaKnown RBP12.6□□□□□ -0.39
HDAC4-216ENST00000544989 RPP25Q9BUL9 199 aaKnown RBP12.6□□□□□ -0.39
HDAC4-216ENST00000544989 OSBPL6Q9BZF3 934 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 ELOVL4Q9GZR5 314 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 BRD9Q9H8M2 597 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 TBC1D17Q9HA65 648 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 TMEM8AQ9HCN3 771 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 ZNF334Q9HCZ1 680 aaPredicted RBP12.6□□□□□ -0.39
HDAC4-216ENST00000544989 CA14Q9ULX7 337 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 MRPS17Q9Y2R5 130 aaKnown RBP12.6□□□□□ -0.39
HDAC4-216ENST00000544989 DMXL1Q9Y485 3027 aa12.6□□□□□ -0.39
HDAC4-216ENST00000544989 BICDL2A1A5D9 508 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 KRBA1A5PL33 1030 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 MAN2B1O00754 1011 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 ZNF263O14978 683 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 NCAM2O15394 837 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 GALR2O43603 387 aaPredicted RBP12.59□□□□□ -0.39
HDAC4-216ENST00000544989 VNN1O95497 513 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 ASS1P00966 412 aaKnown RBP12.59□□□□□ -0.39
HDAC4-216ENST00000544989 PDGFBP01127 241 aaPredicted RBP12.59□□□□□ -0.39
HDAC4-216ENST00000544989 HLA-DRAP01903 254 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 NPR3P17342 541 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 PFKLP17858 780 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 AVPR1AP37288 418 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 GRIK1P39086 918 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 PPP3CCP48454 512 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 VCPP55072 806 aaKnown RBP12.59□□□□□ -0.39
HDAC4-216ENST00000544989 MLLT6P55198 1093 aaPredicted RBP12.59□□□□□ -0.39
HDAC4-216ENST00000544989 NLRP12P59046 1061 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 PSMC1P62191 440 aaKnown RBP12.59□□□□□ -0.39
HDAC4-216ENST00000544989 DLG4P78352 724 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 PLCB2Q00722 1185 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 CYP27A1Q02318 531 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 SLC44A4Q53GD3 710 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 SCARA3Q6AZY7 606 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 ARID3BQ8IVW6 561 aaPredicted RBP12.59□□□□□ -0.39
HDAC4-216ENST00000544989 SCN4BQ8IWT1 228 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 SMYD4Q8IYR2 804 aaPredicted RBP12.59□□□□□ -0.39
HDAC4-216ENST00000544989 B3GALNT2Q8NCR0 500 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 PRSS33Q8NF86 280 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 C8orf48Q96LL4 319 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms