RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 FGF19O95750 216 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 F13A1P00488 732 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 SLC39A12Q504Y0 691 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 DAB2IPQ5VWQ8 1189 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 CNNM4Q6P4Q7 775 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 ITIH5Q86UX2 942 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 ZCCHC14Q8WYQ9 949 aaKnown RBP17.44■□□□□ 0.38
DDX55-212ENST00000544738 DHX58Q96C10 678 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 ZFYVE19Q96K21 471 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 CBWD1Q9BRT8 395 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 SCNM1Q9BWG6 230 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 TMEM121BQ9BXQ6 578 aaPredicted RBP17.44■□□□□ 0.38
DDX55-212ENST00000544738 ZCWPW1Q9H0M4 648 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 CRISPLD1Q9H336 500 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 MAGEF1Q9HAY2 307 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 GTSE1Q9NYZ3 720 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 CFAP45Q9UL16 551 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 SLC8A2Q9UPR5 921 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 WASF3Q9UPY6 502 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 SLC27A5Q9Y2P5 690 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 ASIC1P78348 528 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 CCINQ13939 588 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 VEPH1Q14D04 833 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 FOXD4L5Q5VV16 416 aaPredicted RBP17.43■□□□□ 0.38
DDX55-212ENST00000544738 WSCD1Q658N2 575 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 PKN3Q6P5Z2 889 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 SHC4Q6S5L8 630 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 DCP1BQ8IZD4 617 aaKnown RBP17.43■□□□□ 0.38
DDX55-212ENST00000544738 GPD1LQ8N335 351 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 SYNPOQ8N3V7 929 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 LRRC52Q8N7C0 313 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 OR10T2Q8NGX3 314 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 SHKBP1Q8TBC3 707 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 SPPL2BQ8TCT7 592 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 FOXD4L4Q8WXT5 416 aaPredicted RBP17.43■□□□□ 0.38
DDX55-212ENST00000544738 PSMG2Q969U7 264 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 TMEM209Q96SK2 561 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 LRRC3Q9BY71 257 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 FGFBP2Q9BYJ0 223 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 DNAJC25Q9H1X3 360 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 KIAA1586Q9HCI6 787 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 FAM13BQ9NYF5 915 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 ITGA11Q9UKX5 1188 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 AGAP1Q9UPQ3 857 aa17.43■□□□□ 0.38
DDX55-212ENST00000544738 SCN1AP35498 2009 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 GOLGA8IPA6NC78 632 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 GOLGA8JA6NMD2 632 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 DPYSL4O14531 572 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 EIF3DO15371 548 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDX55-212ENST00000544738 HUS1O60921 280 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 CREB5Q02930 508 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 FCHO2Q0JRZ9 810 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 SURF1Q15526 300 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 DNAJB7Q7Z6W7 309 aaPredicted RBP17.42■□□□□ 0.38
DDX55-212ENST00000544738 TMC8Q8IU68 726 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 CSGALNACT2Q8N6G5 542 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 C1orf127Q8N9H9 656 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 ZSWIM2Q8NEG5 633 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 NOC3LQ8WTT2 800 aaKnown RBP17.42■□□□□ 0.38
DDX55-212ENST00000544738 GATA6Q92908 595 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 ZC3H10Q96K80 434 aaKnown RBP17.42■□□□□ 0.38
DDX55-212ENST00000544738 C7orf25Q9BPX7 421 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 PCIF1Q9H4Z3 704 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 PDE11AQ9HCR9 933 aa17.42■□□□□ 0.38
DDX55-212ENST00000544738 R3HCC1Q9Y3T6 440 aaKnown RBP17.42■□□□□ 0.38
DDX55-212ENST00000544738 COL4A2P08572 1712 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 CCDC163A0A0D9SF12 145 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 A0A1W2PRU2 124 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 ZNF233A6NK53 670 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 CAVIN2O95810 425 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 ITGB3P05106 788 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 TMEM191BP0C7N4 346 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 POLR2BP30876 1174 aaKnown RBP17.41■□□□□ 0.38
DDX55-212ENST00000544738 ME1P48163 572 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 RBP5P82980 135 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 MGAT5BQ3V5L5 792 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 PLK5Q496M5 336 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 ARHGAP15Q53QZ3 475 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 ARID3BQ8IVW6 561 aaPredicted RBP17.41■□□□□ 0.38
DDX55-212ENST00000544738 TMEM86AQ8N2M4 240 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 TTC9BQ8N6N2 239 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 ANKRD36BP1Q96IX9 119 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 LRRC3BQ96PB8 259 aa17.41■□□□□ 0.38
DDX55-212ENST00000544738 SEPT5Q99719 369 aaPredicted RBP17.41■□□□□ 0.38
DDX55-212ENST00000544738 POLR3BQ9NW08 1133 aaPredicted RBP17.41■□□□□ 0.38
DDX55-212ENST00000544738 FLNBO75369 2602 aaKnown RBP17.41■□□□□ 0.38
DDX55-212ENST00000544738 GCN1Q92616 2671 aaKnown RBP17.41■□□□□ 0.38
DDX55-212ENST00000544738 POLR2DO15514 142 aaKnown RBP17.4■□□□□ 0.38
DDX55-212ENST00000544738 WNT7BP56706 349 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 SNRPFP62306 86 aaKnown RBP17.4■□□□□ 0.38
DDX55-212ENST00000544738 TSPY1Q01534 308 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 TNK2Q07912 1038 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 TAF12Q16514 161 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 NFE2Q16621 373 aaPredicted RBP17.4■□□□□ 0.38
DDX55-212ENST00000544738 FOXD4L6Q3SYB3 417 aaPredicted RBP17.4■□□□□ 0.38
DDX55-212ENST00000544738 FAM26FQ5R3K3 315 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 KIAA1211LQ6NV74 962 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 FOXD4L3Q6VB84 417 aaPredicted RBP17.4■□□□□ 0.38
DDX55-212ENST00000544738 UNC13DQ70J99 1090 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 LRRTM3Q86VH5 581 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms