RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 TTI2Q6NXR4 508 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 VSTM1Q6UX27 236 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 C4orf50Q6ZRC1 276 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 OR6B3Q8NGW1 331 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 GIPC2Q8TF65 315 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 MYLPFQ96A32 169 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 TRMT2BQ96GJ1 504 aaKnown RBP12.2□□□□□ -0.46
YBX3-216ENST00000544622 DUSP9Q99956 384 aaKnown RBP12.2□□□□□ -0.46
YBX3-216ENST00000544622 KCNH6Q9H252 994 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 DPEP3Q9H4B8 488 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 APOBEC3GQ9HC16 384 aaKnown RBP12.2□□□□□ -0.46
YBX3-216ENST00000544622 ZFP14Q9HCL3 533 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 TMEM8AQ9HCN3 771 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 MAGEC2Q9UBF1 373 aaPredicted RBP12.2□□□□□ -0.46
YBX3-216ENST00000544622 SOBPA7XYQ1 873 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 A8MXQ7 604 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 PSMA7O14818 248 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 CSH1P0DML2 217 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 CSH2P0DML3 217 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 KRT13P13646 458 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 AVPR2P30518 371 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 CLCN5P51795 746 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 VCPP55072 806 aaKnown RBP12.19□□□□□ -0.46
YBX3-216ENST00000544622 RPL10AP62906 217 aaKnown RBP12.19□□□□□ -0.46
YBX3-216ENST00000544622 VEPH1Q14D04 833 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 SDHAF4Q5VUM1 108 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 CWF19L1Q69YN2 538 aaKnown RBP12.19□□□□□ -0.46
YBX3-216ENST00000544622 SPOPLQ6IQ16 392 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 PAQR9Q6ZVX9 377 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 FILIP1Q7Z7B0 1213 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 SPATA2LQ8IUW3 424 aaPredicted RBP12.19□□□□□ -0.46
YBX3-216ENST00000544622 CRYBG2Q8N1P7 616 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 B3GALNT2Q8NCR0 500 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 ZSCAN18Q8TBC5 510 aaPredicted RBP12.19□□□□□ -0.46
YBX3-216ENST00000544622 SEMA4DQ92854 862 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 SLC35C1Q96A29 364 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 FAXDC2Q96IV6 333 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 SPATA17Q96L03 361 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 LRRC3BQ96PB8 259 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 KXD1Q9BQD3 176 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 SLC46A2Q9BY10 475 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 BCO2Q9BYV7 579 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 SNX25Q9H3E2 840 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 ATXN3LQ9H3M9 355 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 TASP1Q9H6P5 420 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 SMYD3Q9H7B4 428 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 TRPV5Q9NQA5 729 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 TMEM30AQ9NV96 361 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 COQ4Q9Y3A0 265 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 MUC6Q6W4X9 2439 aa12.19□□□□□ -0.46
YBX3-216ENST00000544622 SHISA7A6NL88 538 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 ARNTLO00327 626 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 TADA3O75528 432 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 EPB41P11171 864 aaKnown RBP12.18□□□□□ -0.46
YBX3-216ENST00000544622 BDNFP23560 247 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 CDC25CP30307 473 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 VIPR2P41587 438 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 RAP1GAPP47736 663 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 CACNA2D1P54289 1103 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 NLRP12P59046 1061 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 STARD6P59095 220 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 INCA1Q0VD86 236 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 STIM1Q13586 685 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 CBWD6Q4V339 395 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 CBWD3Q5JTY5 395 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 CBWD5Q5RIA9 395 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 VITQ6UXI7 678 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 UNC93AQ86WB7 457 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 ARID3BQ8IVW6 561 aaPredicted RBP12.18□□□□□ -0.46
YBX3-216ENST00000544622 MFSD6LQ8IWD5 586 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 SIX5Q8N196 739 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 TMEM105Q8N8V8 129 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 TRIML1Q8N9V2 468 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 STKLD1Q8NE28 680 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 RSPRY1Q96DX4 576 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 C8orf48Q96LL4 319 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 CEP63Q96MT8 703 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 TSG101Q99816 390 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 DDX23Q9BUQ8 820 aaKnown RBP12.18□□□□□ -0.46
YBX3-216ENST00000544622 B3GNT5Q9BYG0 378 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 LMBRD1Q9NUN5 540 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 RAB20Q9NX57 234 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 ZMYM5Q9UJ78 669 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 HCN4Q9Y3Q4 1203 aa12.18□□□□□ -0.46
YBX3-216ENST00000544622 SLC38A8A6NNN8 435 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 PMM2O15305 246 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 PI15O43692 258 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 P4HA1P13674 534 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 PSMC3P17980 439 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 AOC1P19801 751 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 NUBP1P53384 320 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 NOP14P78316 857 aaKnown RBP12.17□□□□□ -0.46
YBX3-216ENST00000544622 CYP27A1Q02318 531 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 FCHO2Q0JRZ9 810 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 CAMK4Q16566 473 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 SLC44A4Q53GD3 710 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 MDH1BQ5I0G3 518 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 ASTLQ6HA08 431 aaPredicted RBP12.17□□□□□ -0.46
YBX3-216ENST00000544622 PHLDB3Q6NSJ2 640 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms