RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 AIM2O14862 343 aa13.34□□□□□ -0.27
CHD4-211ENST00000544484 TCN1P20061 433 aaPredicted RBP13.34□□□□□ -0.27
CHD4-211ENST00000544484 CHRM3P20309 590 aa13.34□□□□□ -0.27
CHD4-211ENST00000544484 SGO1Q5FBB7 561 aa13.34□□□□□ -0.27
CHD4-211ENST00000544484 HS6ST3Q8IZP7 471 aa13.34□□□□□ -0.27
CHD4-211ENST00000544484 OPTNQ96CV9 577 aa13.34□□□□□ -0.27
CHD4-211ENST00000544484 KIDINS220Q9ULH0 1771 aa13.33□□□□□ -0.27
CHD4-211ENST00000544484 LOC100653049A0A140TA62 436 aa13.33□□□□□ -0.27
CHD4-211ENST00000544484 KRT34O76011 436 aa13.33□□□□□ -0.27
CHD4-211ENST00000544484 SREBF2Q12772 1141 aa13.33□□□□□ -0.27
CHD4-211ENST00000544484 ZFPM1Q8IX07 1006 aa13.33□□□□□ -0.27
CHD4-211ENST00000544484 ARMC2Q8NEN0 867 aa13.33□□□□□ -0.27
CHD4-211ENST00000544484 KLC4Q9NSK0 619 aa13.33□□□□□ -0.27
CHD4-211ENST00000544484 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.33□□□□□ -0.27
CHD4-211ENST00000544484 MAP2P11137 1827 aaKnown RBP13.33□□□□□ -0.28
CHD4-211ENST00000544484 TRIM49D1C9J1S8 452 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 CXCL8P10145 99 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 MAPK7Q13164 816 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 AGBL2Q5U5Z8 902 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 SV2AQ7L0J3 742 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 KIAA0895Q8NCT3 520 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 SEC16BQ96JE7 1060 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 SHCBP1LQ9BZQ2 653 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 ARHGAP20Q9P2F6 1191 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 HNRNPCL2B2RXH8 293 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 FAM86B1E9PN63 330 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 HNRNPCL1O60812 293 aaKnown RBP13.33□□□□□ -0.28
CHD4-211ENST00000544484 DGKIO75912 1065 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 FAM86B2P0C5J1 330 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 GARTP22102 1010 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 HERVK_113P62684 666 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 KIF2BQ8N4N8 673 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 ZC3H15Q8WU90 426 aaKnown RBP13.33□□□□□ -0.28
CHD4-211ENST00000544484 SCHIP1Q9P0W5 487 aaPredicted RBP13.33□□□□□ -0.28
CHD4-211ENST00000544484 ZNF189O75820 626 aaPredicted RBP13.33□□□□□ -0.28
CHD4-211ENST00000544484 PGM5Q15124 567 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 LONP2Q86WA8 852 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 FAM131BQ86XD5 332 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 STAMBPL1Q96FJ0 436 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 YIPF3Q9GZM5 350 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 SPATC1LQ9H0A9 340 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 MROH8Q9H579 483 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 SETD4Q9NVD3 440 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 AP5Z1O43299 807 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 FBXW4P57775 412 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 CYP24A1Q07973 514 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 GTF2H3Q13889 308 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 ATP8B4Q8TF62 1192 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 TATDN2Q93075 761 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 CGRRF1Q99675 332 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 MTIF3Q9H2K0 278 aaKnown RBP13.33□□□□□ -0.28
CHD4-211ENST00000544484 CISHQ9NSE2 258 aa13.33□□□□□ -0.28
CHD4-211ENST00000544484 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 F8VZ95 297 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 CPA2P48052 419 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 DNAJC3Q13217 504 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 TTC39BQ5VTQ0 682 aaPredicted RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 TDRD10Q5VZ19 366 aaKnown RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 C4orf19Q8IY42 314 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 FAM172AQ8WUF8 416 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 SPIRE2Q8WWL2 714 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 TSC22D3Q99576 134 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 ZBTB39O15060 712 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 ENDOD1O94919 500 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 VDRP11473 427 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 IL10P22301 178 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 CHI3L2Q15782 390 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 THTPAQ9BU02 230 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 SMIM22K7EJ46 135 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 MUTP22033 750 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 ST3GAL1Q11201 340 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 NAPEPLDQ6IQ20 393 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 BLOC1S5Q8TDH9 187 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 ZC3H11AO75152 810 aaKnown RBP eCLIP13.32□□□□□ -0.282e-9■□□□□ 8.9
CHD4-211ENST00000544484 LAMTOR4Q0VGL1 99 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 FBXW10Q5XX13 1052 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 MAP1SQ66K74 1059 aaPredicted RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 LAYNQ6UX15 382 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 RRM2BQ7LG56 351 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 TAGAPQ8N103 731 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 EPS8L3Q8TE67 593 aaKnown RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 APOL2Q9BQE5 337 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 FOXP3Q9BZS1 431 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 KDM4CQ9H3R0 1056 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 IL1RL2Q9HB29 575 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 STX18Q9P2W9 335 aaKnown RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 RPS6KL1Q9Y6S9 549 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 H0Y626 953 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 H3BRB1 525 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 WNT10BO00744 389 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 MAP3K7CLP57077 242 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 OTUD4Q01804 1114 aaKnown RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 ADGRF2Q8IZF7 708 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 TRAPPC12Q8WVT3 735 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 ANKRD7Q92527 254 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 OTULINQ96BN8 352 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 TMEM169Q96HH4 297 aa13.32□□□□□ -0.28
CHD4-211ENST00000544484 NAF1Q96HR8 494 aaKnown RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 DACH2Q96NX9 599 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms