RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 CALB1P05937 261 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 MAMLD1Q13495 774 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 LPIN1Q14693 890 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 TTC27Q6P3X3 843 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 JAMLQ86YT9 394 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 SLC43A3Q8NBI5 491 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 CD101Q93033 1021 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 LRRC45Q96CN5 670 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 HEXIM2Q96MH2 286 aaKnown RBP15.13■□□□□ 0.01
VPS33A-209ENST00000544349 ZFP42Q96MM3 310 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 PPP1R10Q96QC0 940 aaKnown RBP15.13■□□□□ 0.01
VPS33A-209ENST00000544349 MRPL45Q9BRJ2 306 aaKnown RBP15.13■□□□□ 0.01
VPS33A-209ENST00000544349 NT5C1AQ9BXI3 368 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 WNT8AQ9H1J5 351 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 CENPHQ9H3R5 247 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 GOLGA2P5Q9HBQ8 144 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 UTP11Q9Y3A2 253 aaKnown RBP15.13■□□□□ 0.01
VPS33A-209ENST00000544349 PNPLA4P41247 253 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 PEX5P50542 639 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 ZNF618Q5T7W0 954 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 DUPD1Q68J44 220 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 UBL4BQ8N7F7 174 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 PRELID2Q8N945 189 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 ZNF560Q96MR9 790 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 TRAIPQ9BWF2 469 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 TRIM7Q9C029 511 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 STARD7Q9NQZ5 370 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 FAM114A2Q9NRY5 505 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 ZDHHC18Q9NUE0 388 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 PARVAQ9NVD7 372 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 KIAA1257Q9ULG3 409 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 SQORQ9Y6N5 450 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 SCINQ9Y6U3 715 aa15.13■□□□□ 0.01
VPS33A-209ENST00000544349 KPNA7A9QM74 516 aa15.12■□□□□ 0.01
VPS33A-209ENST00000544349 HMGB1P1B2RPK0 211 aaPredicted RBP15.12■□□□□ 0.01
VPS33A-209ENST00000544349 CAND2O75155 1236 aa15.12■□□□□ 0.01
VPS33A-209ENST00000544349 HPDP32754 393 aaPredicted RBP15.12■□□□□ 0.01
VPS33A-209ENST00000544349 PTGIRP43119 386 aa15.12■□□□□ 0.01
VPS33A-209ENST00000544349 DHX9Q08211 1270 aaKnown RBP15.12■□□□□ 0.01
VPS33A-209ENST00000544349 DSC3Q14574 896 aa15.12■□□□□ 0.01
VPS33A-209ENST00000544349 CNGA2Q16280 664 aa15.12■□□□□ 0.01
VPS33A-209ENST00000544349 SGO2Q562F6 1265 aa15.12■□□□□ 0.01
VPS33A-209ENST00000544349 UBAP2Q5T6F2 1119 aaKnown RBP15.12■□□□□ 0.01
VPS33A-209ENST00000544349 MRPL10Q7Z7H8 261 aaKnown RBP15.12■□□□□ 0.01
VPS33A-209ENST00000544349 ERICH1Q86X53 443 aa15.12■□□□□ 0.01
VPS33A-209ENST00000544349 GSTCDQ8NEC7 633 aa15.12■□□□□ 0.01
VPS33A-209ENST00000544349 TXLNGYQ9BZA5 131 aa15.12■□□□□ 0.01
VPS33A-209ENST00000544349 TRPV6Q9H1D0 765 aa15.12■□□□□ 0.01
VPS33A-209ENST00000544349 GDAP2Q9NXN4 497 aa15.12■□□□□ 0.01
VPS33A-209ENST00000544349 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.12■□□□□ 0.01
VPS33A-209ENST00000544349 DCDC2CA8MYV0 355 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 O00370 1275 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 SPTLC1O15269 473 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 SPOPO43791 374 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 MGEA5O60502 916 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 PHF2O75151 1096 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 MICAL2O94851 1124 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 PYGMP11217 842 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 CTNNA2P26232 953 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 LRPAP1P30533 357 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 LSP1P33241 339 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 MLH1P40692 756 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 TAF6P49848 677 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 SOWAHAQ2M3V2 549 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 ZDHHC24Q6UX98 284 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 SH3TC2Q8TF17 1288 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 LPPQ93052 612 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 GAD1Q99259 594 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 ERP44Q9BS26 406 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.11■□□□□ 0.01
VPS33A-209ENST00000544349 EPB41L4BQ9H329 900 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 CYTH4Q9UIA0 394 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 GIT1Q9Y2X7 761 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 NME7Q9Y5B8 376 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 GOLGA6L10A0A0M3HER8 536 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 TCRBV5S1A1TA0A578 114 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 ZNF623O75123 536 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 MYZAPP0CAP1 466 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 CKBP12277 381 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 SLC1A1P43005 524 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 EMC10Q5UCC4 262 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 AGMOQ6ZNB7 445 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 UNC93AQ86WB7 457 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 FEZF2Q8TBJ5 459 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 FMO2Q99518 471 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 SLC38A7Q9NVC3 462 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 PHF24Q9UPV7 400 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 ATP8A1Q9Y2Q0 1164 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 PCDHA3Q9Y5H8 950 aa15.11■□□□□ 0.01
VPS33A-209ENST00000544349 PPFIA2O75334 1257 aa15.1■□□□□ 0.01
VPS33A-209ENST00000544349 RAB27AP51159 221 aa15.1■□□□□ 0.01
VPS33A-209ENST00000544349 SV2CQ496J9 727 aa15.1■□□□□ 0.01
VPS33A-209ENST00000544349 PTPN20Q4JDL3 420 aa15.1■□□□□ 0.01
VPS33A-209ENST00000544349 NAP1L3Q99457 506 aaPredicted RBP15.1■□□□□ 0.01
VPS33A-209ENST00000544349 RAB17Q9H0T7 212 aa15.1■□□□□ 0.01
VPS33A-209ENST00000544349 MIOSQ9NXC5 875 aa15.1■□□□□ 0.01
VPS33A-209ENST00000544349 GRHL1Q9NZI5 618 aa15.1■□□□□ 0.01
VPS33A-209ENST00000544349 STRIP2Q9ULQ0 834 aa15.1■□□□□ 0.01
VPS33A-209ENST00000544349 SNX24Q9Y343 169 aa15.1■□□□□ 0.01
VPS33A-209ENST00000544349 HTTP42858 3142 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms