RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 FNIP1Q8TF40 1166 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 MCEEQ96PE7 176 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 TMEM134Q9H6X4 195 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 JPH1Q9HDC5 661 aaPredicted RBP14.41□□□□□ -0.1
VPS33A-208ENST00000543633 HOMER2Q9NSB8 354 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 KLHL11Q9NVR0 708 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 SLC9A2Q9UBY0 812 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 POLIQ9UNA4 740 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
VPS33A-208ENST00000543633 ADGRA2Q96PE1 1338 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 LRRD1A4D1F6 860 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 C3orf70A6NLC5 250 aaPredicted RBP14.41□□□□□ -0.1
VPS33A-208ENST00000543633 CBX6O95503 412 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 ASS1P00966 412 aaKnown RBP14.41□□□□□ -0.1
VPS33A-208ENST00000543633 NR3C2P08235 984 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 ETS1P14921 441 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 WNT7BP56706 349 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 LBRQ14739 615 aaKnown RBP14.41□□□□□ -0.1
VPS33A-208ENST00000543633 KRT72Q14CN4 511 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 ATP13A4Q4VNC1 1196 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 ZNF449Q6P9G9 518 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 ABHD15Q6UXT9 468 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 THNSL1Q8IYQ7 743 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 ARMC2Q8NEN0 867 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 DCAKDQ8WVC6 231 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 CPT1BQ92523 772 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 MSTO1Q9BUK6 570 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 OSBPL1AQ9BXW6 950 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 PORCNQ9H237 461 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 NPHS2Q9NP85 383 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 MTO1Q9Y2Z2 717 aaKnown RBP14.41□□□□□ -0.1
VPS33A-208ENST00000543633 ZNF541Q9H0D2 1346 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.4□□□□□ -0.1
VPS33A-208ENST00000543633 FGFR1P11362 822 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 TCF4P15884 667 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 ADRA1DP25100 572 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 ACOT2P49753 483 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 MAPK6Q16659 721 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 WDR78Q5VTH9 848 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 SWSAP1Q6NVH7 229 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 C4orf50Q6ZRC1 276 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 WDR49Q8IV35 697 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 CCDC60Q8IWA6 550 aaPredicted RBP14.4□□□□□ -0.1
VPS33A-208ENST00000543633 BRSK2Q8IWQ3 736 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 KIRREL3Q8IZU9 778 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 KCNV2Q8TDN2 545 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 APBB2Q92870 758 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 PTCD3Q96EY7 689 aaKnown RBP14.4□□□□□ -0.1
VPS33A-208ENST00000543633 ZBED3Q96IU2 234 aaPredicted RBP14.4□□□□□ -0.1
VPS33A-208ENST00000543633 BTBD10Q9BSF8 475 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 TMEM121Q9BTD3 319 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 DENND2DQ9H6A0 471 aaPredicted RBP14.4□□□□□ -0.1
VPS33A-208ENST00000543633 MANSC1Q9H8J5 431 aa14.4□□□□□ -0.1
VPS33A-208ENST00000543633 IQANK1A0A1B0GTG1 560 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 F8VP50 259 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 KLF11O14901 512 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 SUPT20HL2P0C7V6 817 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 POLR2BP30876 1174 aaKnown RBP14.39□□□□□ -0.11
VPS33A-208ENST00000543633 OAZ1P54368 228 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 OGDHQ02218 1023 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 TFDP1Q14186 410 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 ZRSR2Q15696 482 aaKnown RBP14.39□□□□□ -0.11
VPS33A-208ENST00000543633 HADHQ16836 314 aaKnown RBP14.39□□□□□ -0.11
VPS33A-208ENST00000543633 SUPT20HL1Q3ZLR7 823 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 APBB1IPQ7Z5R6 666 aaPredicted RBP14.39□□□□□ -0.11
VPS33A-208ENST00000543633 PDIK1LQ8N165 341 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.39□□□□□ -0.11
VPS33A-208ENST00000543633 AGBL3Q8NEM8 1001 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 DEPTORQ8TB45 409 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 SKA1Q96BD8 255 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 APOPT1Q96IL0 206 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 CYTH2Q99418 400 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 TSSK1BQ9BXA7 367 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 NIF3L1Q9GZT8 377 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 DHX33Q9H6R0 707 aaKnown RBP14.39□□□□□ -0.11
VPS33A-208ENST00000543633 RNF146Q9NTX7 359 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 KANSL3Q9P2N6 904 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 DOCK1Q14185 1865 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 K7ERI5 159 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 CLGNO14967 610 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 ARL2P36404 184 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 VHLP40337 213 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 PTDSS1P48651 473 aaKnown RBP14.39□□□□□ -0.11
VPS33A-208ENST00000543633 NEK3P51956 506 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 ACTR2P61160 394 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 YWHAEP62258 255 aaKnown RBP14.39□□□□□ -0.11
VPS33A-208ENST00000543633 CDK16Q00536 496 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 OCRLQ01968 901 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 PLCB3Q01970 1234 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 SLC25A11Q02978 314 aaKnown RBP14.39□□□□□ -0.11
VPS33A-208ENST00000543633 SLC18A2Q05940 514 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 CDK18Q07002 472 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 SURF1Q15526 300 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 TRMT1LQ7Z2T5 733 aaKnown RBP14.39□□□□□ -0.11
VPS33A-208ENST00000543633 MTDHQ86UE4 582 aaKnown RBP14.39□□□□□ -0.11
VPS33A-208ENST00000543633 ANKMY2Q8IV38 441 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 ARHGAP24Q8N264 748 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 TCP10LQ8TDR4 215 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 NSUN6Q8TEA1 469 aaKnown RBP14.39□□□□□ -0.11
VPS33A-208ENST00000543633 DNAJC9Q8WXX5 260 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms