RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 TRIM16O95361 564 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 AUHQ13825 339 aaKnown RBP20.16■□□□□ 0.82
SUDS3-204ENST00000543473 TRADDQ15628 312 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 TFDP3Q5H9I0 405 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 TTC33Q6PID6 262 aaPredicted RBP20.16■□□□□ 0.82
SUDS3-204ENST00000543473 PCYOX1LQ8NBM8 494 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 TMEM143Q96AN5 459 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 DAB1O75553 588 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 EFNA5P52803 228 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 BAATQ14032 418 aaPredicted RBP20.16■□□□□ 0.82
SUDS3-204ENST00000543473 C2CD2Q9Y426 696 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 PPME1Q9Y570 386 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 RGS7P49802 495 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 SLC25A41Q8N5S1 370 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 JADE3Q92613 823 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 INPP4AQ96PE3 977 aaPredicted RBP20.16■□□□□ 0.82
SUDS3-204ENST00000543473 PALMDQ9NP74 551 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 SAR1AQ9NR31 198 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 ATXN2Q99700 1313 aaKnown RBP20.16■□□□□ 0.82
SUDS3-204ENST00000543473 KIF1AQ12756 1690 aa20.16■□□□□ 0.82
SUDS3-204ENST00000543473 GRAP2O75791 330 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 ADORA2BP29275 332 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 HNRNPH3P31942 346 aaKnown RBP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 PLOD1Q02809 727 aaPredicted RBP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 ARHGEF6Q15052 776 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 MOXD1Q6UVY6 613 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 PTF1AQ7RTS3 328 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 DDHD1Q8NEL9 900 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 TCP10LQ8TDR4 215 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 ZDHHC15Q96MV8 337 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 NUDT12Q9BQG2 462 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 DCLK3Q9C098 648 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 MRGBPQ9NV56 204 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 AP1G2O75843 785 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 POLBP06746 335 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 PSMC3P17980 439 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 CAPRIN1Q14444 709 aaKnown RBP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 ZNF720Q7Z2F6 126 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 PRUNE1Q86TP1 453 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 RBM46Q8TBY0 533 aaKnown RBP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 OTUD4Q01804 1114 aaKnown RBP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 FOXD4Q12950 439 aaPredicted RBP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 XKR3Q5GH77 459 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 CYP4A22Q5TCH4 519 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 NUP93Q8N1F7 819 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 ZNF184Q99676 751 aaPredicted RBP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 JPH1Q9HDC5 661 aaPredicted RBP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 TOPORSQ9NS56 1045 aaPredicted RBP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 MCM8Q9UJA3 840 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 HUS1O60921 280 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 SRP72O76094 671 aaKnown RBP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 KCNA4P22459 653 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 RPS12P25398 132 aaKnown RBP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 PSMD7P51665 324 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 PKN2Q16513 984 aaKnown RBP20.15■□□□□ 0.82
SUDS3-204ENST00000543473 UGP2Q16851 508 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 SLC26A11Q86WA9 606 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 BAP1Q92560 729 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 ETAA1Q9NY74 926 aa20.15■□□□□ 0.82
SUDS3-204ENST00000543473 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.14■□□□□ 0.82
SUDS3-204ENST00000543473 CCDC78A2IDD5 438 aa20.14■□□□□ 0.82
SUDS3-204ENST00000543473 THRAP10827 490 aa20.14■□□□□ 0.82
SUDS3-204ENST00000543473 MRPS15P82914 257 aaKnown RBP20.14■□□□□ 0.82
SUDS3-204ENST00000543473 CDR2LQ86X02 465 aaPredicted RBP20.14■□□□□ 0.82
SUDS3-204ENST00000543473 RNF149Q8NC42 400 aa20.14■□□□□ 0.82
SUDS3-204ENST00000543473 ZNF75CPQ92670 426 aaPredicted RBP20.14■□□□□ 0.82
SUDS3-204ENST00000543473 CTNNAL1Q9UBT7 734 aa20.14■□□□□ 0.82
SUDS3-204ENST00000543473 DNAJC16Q9Y2G8 782 aa20.14■□□□□ 0.82
SUDS3-204ENST00000543473 SPDYE2BA6NHP3 402 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 SPDYE6P0CI01 402 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 QPCTQ16769 361 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 LAYNQ6UX15 382 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 EP400NLQ6ZTU2 488 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 CLEC4FQ8N1N0 589 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 MXRA8Q9BRK3 442 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 PCDHA3Q9Y5H8 950 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 MYCP01106 439 aaPredicted RBP20.14■□□□□ 0.81
SUDS3-204ENST00000543473 MCL1Q07820 350 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 FASTKD5Q7L8L6 764 aaKnown RBP20.14■□□□□ 0.81
SUDS3-204ENST00000543473 MMP19Q99542 508 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 GID8Q9NWU2 228 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 BLOC1S6Q9UL45 172 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 TBX20Q9UMR3 447 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 GLRA3O75311 464 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 HSPA1AP0DMV8 641 aaKnown RBP20.14■□□□□ 0.81
SUDS3-204ENST00000543473 HSPA1BP0DMV9 641 aaKnown RBP20.14■□□□□ 0.81
SUDS3-204ENST00000543473 PSMC6P62333 389 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 RRP1BQ14684 758 aaKnown RBP20.14■□□□□ 0.81
SUDS3-204ENST00000543473 FAM192AQ9GZU8 254 aa20.14■□□□□ 0.81
SUDS3-204ENST00000543473 ILKAPQ9H0C8 392 aaPredicted RBP20.14■□□□□ 0.81
SUDS3-204ENST00000543473 C19orf81C9J6K1 198 aa20.13■□□□□ 0.81
SUDS3-204ENST00000543473 CUL2Q13617 745 aa20.13■□□□□ 0.81
SUDS3-204ENST00000543473 ZNF786Q8N393 782 aa20.13■□□□□ 0.81
SUDS3-204ENST00000543473 DACH2Q96NX9 599 aa20.13■□□□□ 0.81
SUDS3-204ENST00000543473 DNAJC18Q9H819 358 aa20.13■□□□□ 0.81
SUDS3-204ENST00000543473 EXTL3O43909 919 aa20.13■□□□□ 0.81
SUDS3-204ENST00000543473 TMCC1O94876 653 aa20.13■□□□□ 0.81
SUDS3-204ENST00000543473 NUDT17P0C025 328 aa20.13■□□□□ 0.81
SUDS3-204ENST00000543473 IL1R1P14778 569 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms