RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 DNM1LO00429 736 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 ALOX15BO15296 676 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 CILPO75339 1184 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 TXNP10599 105 aaKnown RBP6.89□□□□□ -1.31
PTPRO-208ENST00000542557 CETPP11597 493 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 PECAM1P16284 738 aaPredicted RBP6.89□□□□□ -1.31
PTPRO-208ENST00000542557 RFC1P35251 1148 aaPredicted RBP6.89□□□□□ -1.31
PTPRO-208ENST00000542557 IFNAR2P48551 515 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 CLCN3P51790 818 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 PTPN11Q06124 597 aaPredicted RBP6.89□□□□□ -1.31
PTPRO-208ENST00000542557 GPS1Q13098 491 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 AMHR2Q16671 573 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 SPRED3Q2MJR0 410 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 WDR72Q3MJ13 1102 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 FASTKD5Q7L8L6 764 aaKnown RBP6.89□□□□□ -1.31
PTPRO-208ENST00000542557 XYLT1Q86Y38 959 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 TTC39CQ8N584 583 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 GLIS1Q8NBF1 620 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 SLC4A11Q8NBS3 891 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 CXorf38Q8TB03 319 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 MCRS1Q96EZ8 462 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 R3HDMLQ9H3Y0 253 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 SAYSD1Q9NPB0 183 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 SENP1Q9P0U3 644 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 FETUBQ9UGM5 382 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 FARP1Q9Y4F1 1045 aaPredicted RBP6.89□□□□□ -1.31
PTPRO-208ENST00000542557 MCM3APO60318 1980 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 MAGEB2O15479 319 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 HMGCRP04035 888 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 NFICP08651 508 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 P4HA1P13674 534 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 CD19P15391 556 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 CREB1P16220 341 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 RDXP35241 583 aaKnown RBP6.88□□□□□ -1.31
PTPRO-208ENST00000542557 PSMC1P62191 440 aaKnown RBP6.88□□□□□ -1.31
PTPRO-208ENST00000542557 XRCC4Q13426 336 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 TMEM63BQ5T3F8 832 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 CENPUQ71F23 418 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 CYP4X1Q8N118 509 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 ARFGAP1Q8N6T3 406 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 JOSD2Q8TAC2 188 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 GTF3C2Q8WUA4 911 aaPredicted RBP6.88□□□□□ -1.31
PTPRO-208ENST00000542557 TRAPPC12Q8WVT3 735 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 PRCCQ92733 491 aaPredicted RBP6.88□□□□□ -1.31
PTPRO-208ENST00000542557 MAGEB18Q96M61 343 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 SDCBP2Q9H190 292 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 MINDY3Q9H8M7 445 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 IFT122Q9HBG6 1241 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 NKIRAS1Q9NYS0 192 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 NXF1Q9UBU9 619 aaKnown RBP6.88□□□□□ -1.31
PTPRO-208ENST00000542557 SLC24A2Q9UI40 661 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 CYTH4Q9UIA0 394 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTPRO-208ENST00000542557 SLC12A4Q9UP95 1085 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 USP15Q9Y4E8 981 aaPredicted RBP6.88□□□□□ -1.31
PTPRO-208ENST00000542557 EXOC1LA0A1B0GW35 172 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 GPR25O00155 361 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 PRPF4O43172 522 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTPRO-208ENST00000542557 GJB1P08034 283 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 KRT19P08727 400 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 ZSCAN5DPP0CG00 497 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 STAG3L1P0CL83 205 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 VDRP11473 427 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 GCAP28676 217 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 PCK1P35558 622 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 RAP1GAPP47736 663 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 OSTNP61366 133 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 ARHGAP1Q07960 439 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 INCA1Q0VD86 236 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 LAMC2Q13753 1193 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 Q3C1V9 767 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 TRPM8Q7Z2W7 1104 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 PRUNE1Q86TP1 453 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 TRABD2AQ86V40 505 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 NT5DC4Q86YG4 428 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 TMEM192Q8IY95 271 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 COPS5Q92905 334 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 CLMNQ96JQ2 1002 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 CPXM1Q96SM3 734 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 ELAC2Q9BQ52 826 aaKnown RBP6.88□□□□□ -1.31
PTPRO-208ENST00000542557 MIS12Q9H081 205 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 PDZD7Q9H5P4 517 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 SLC40A1Q9NP59 571 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 METTL5Q9NRN9 209 aaKnown RBP6.88□□□□□ -1.31
PTPRO-208ENST00000542557 C2CD2Q9Y426 696 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 RALGAPA2Q2PPJ7 1873 aa6.88□□□□□ -1.31
PTPRO-208ENST00000542557 FAM47DPA6NHR8 397 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 LACTBL1A8MY62 500 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 TCP11X1B4DZS4 312 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 RASA4BC9J798 803 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 E7ESA3 106 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 GOLGA8SH3BPF8 625 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 SGK1O00141 431 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 RASA4O43374 803 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ABCB7O75027 752 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 DDNO94850 711 aaPredicted RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 MICAL2O94851 1124 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 SUN1O94901 812 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ERBB2P04626 1255 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ITGB3P05106 788 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms