RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 ATP2A1O14983 1001 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 PDGFRBP09619 1106 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 GMPRP36959 345 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 NBPF20Q3BBV1 942 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 ZNF667Q5HYK9 610 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 ENOSF1Q7L5Y1 443 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 EXD1Q8NHP7 514 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 NSMCE1Q8WV22 266 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 CKAP2Q8WWK9 683 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 MRPL4Q9BYD3 311 aaKnown RBP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 RNPEPQ9H4A4 650 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 BRWD3Q6RI45 1802 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 GREB1LQ9C091 1923 aaPredicted RBP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 A0A087WZ62 844 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 ATP5DP30049 168 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 CRADDP78560 199 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 SGSM1Q2NKQ1 1148 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 EML3Q32P44 896 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 ATF7IP2Q5U623 682 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 PLEKHA7Q6IQ23 1121 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 CASC4Q6P4E1 433 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 CENPUQ71F23 418 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 SCUBE3Q8IX30 993 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 MAIP1Q8WWC4 291 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 NDRG1Q92597 394 aaKnown RBP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 TRIM11Q96F44 468 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 CDHR1Q96JP9 859 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 FDXACB1Q9BRP7 624 aaPredicted RBP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 KDM4CQ9H3R0 1056 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 DHX33Q9H6R0 707 aaKnown RBP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 ARL2BPQ9Y2Y0 163 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 DNALI1O14645 258 aaPredicted RBP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 ASAP2O43150 1006 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 FARP2O94887 1054 aaPredicted RBP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 IQCF3P0C7M6 154 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 TXNP10599 105 aaKnown RBP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 FGFR1P11362 822 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 NQO1P15559 274 aaKnown RBP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 POLR2BP30876 1174 aaKnown RBP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 GBP1P32455 592 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 ZC3H12AQ5D1E8 599 aaKnown RBP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 TFDP3Q5H9I0 405 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 FKBP1CQ5VVH2 108 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 C15orf39Q6ZRI6 1047 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 IGDCC3Q8IVU1 814 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 SUGP1Q8IWZ8 645 aaKnown RBP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 SEPT1Q8WYJ6 367 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 ADPGKQ9BRR6 497 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 PDLIM7Q9NR12 457 aa14.23□□□□□ -0.13
PTPN1-202ENST00000541713 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.23□□□□□ -0.13
PTPN1-202ENST00000541713 TOM1L1O75674 476 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 ERBB2P04626 1255 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 RPL22P35268 128 aaKnown RBP14.22□□□□□ -0.13
PTPN1-202ENST00000541713 COPS2P61201 443 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 SETDB1Q15047 1291 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 MTDHQ86UE4 582 aaKnown RBP14.22□□□□□ -0.13
PTPN1-202ENST00000541713 KATNAL2Q8IYT4 538 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 RCOR2Q8IZ40 523 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 NLGN2Q8NFZ4 835 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 ATXN7L3BQ96GX2 97 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 FAM81BQ96LP2 452 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 FAM111AQ96PZ2 611 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 MECRQ9BV79 373 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 ROPN1BQ9BZX4 212 aaPredicted RBP14.22□□□□□ -0.13
PTPN1-202ENST00000541713 ROPN1Q9HAT0 212 aaPredicted RBP14.22□□□□□ -0.13
PTPN1-202ENST00000541713 AVENQ9NQS1 362 aaPredicted RBP14.22□□□□□ -0.13
PTPN1-202ENST00000541713 ACSS2Q9NR19 701 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 RAB6BQ9NRW1 208 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 ARMCX1Q9P291 453 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 LRCH4O75427 683 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 RNF8O76064 485 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 ANP32DO95626 131 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 ASS1P00966 412 aaKnown RBP14.22□□□□□ -0.13
PTPN1-202ENST00000541713 APRTP07741 180 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 CYP2C8P10632 490 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 MIPP30301 263 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 MSH2P43246 934 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 PTP4A2Q12974 167 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 KLRG1Q96E93 195 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 ANKRD36BP1Q96IX9 119 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 RBM41Q96IZ5 413 aaKnown RBP14.22□□□□□ -0.13
PTPN1-202ENST00000541713 TIPINQ9BVW5 301 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 SHCBP1LQ9BZQ2 653 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 SDCBP2Q9H190 292 aa14.22□□□□□ -0.13
PTPN1-202ENST00000541713 RPF1Q9H9Y2 349 aaKnown RBP14.22□□□□□ -0.13
PTPN1-202ENST00000541713 MYO18AQ92614 2054 aaKnown RBP14.21□□□□□ -0.13
PTPN1-202ENST00000541713 hCG_1818297A0A087WSY0 165 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 LACTBL1A8MY62 500 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 GPR25O00155 361 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 PSTPIP1O43586 416 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 TMEM63AO94886 807 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 PDGFRAP16234 1089 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 KRT81Q14533 505 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 CCDC142Q17RM4 750 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 ARMC9Q7Z3E5 817 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 ARFGAP1Q8N6T3 406 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 REPS2Q8NFH8 660 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 TCP10LQ8TDR4 215 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 PRR11Q96HE9 360 aaPredicted RBP14.21□□□□□ -0.13
PTPN1-202ENST00000541713 TXNRD2Q9NNW7 524 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms