RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 HABP4Q5JVS0 413 aaKnown RBP29.47■■■□□ 2.31
CCM2-218ENST00000541586 NAA35Q5VZE5 725 aa29.47■■■□□ 2.31
CCM2-218ENST00000541586 DDX53Q86TM3 631 aaKnown RBP29.47■■■□□ 2.31
CCM2-218ENST00000541586 VPS52Q8N1B4 723 aa29.47■■■□□ 2.31
CCM2-218ENST00000541586 SPPL3Q8TCT6 385 aa29.47■■■□□ 2.31
CCM2-218ENST00000541586 POF1BQ8WVV4 589 aa29.47■■■□□ 2.31
CCM2-218ENST00000541586 CPA5Q8WXQ8 436 aa29.47■■■□□ 2.31
CCM2-218ENST00000541586 MRPL45Q9BRJ2 306 aaKnown RBP29.47■■■□□ 2.31
CCM2-218ENST00000541586 VN1R3Q9BXE9 311 aa29.47■■■□□ 2.31
CCM2-218ENST00000541586 L2HGDHQ9H9P8 463 aa29.47■■■□□ 2.31
CCM2-218ENST00000541586 H3BNC9 293 aa29.46■■■□□ 2.31
CCM2-218ENST00000541586 GRM6O15303 877 aa29.46■■■□□ 2.31
CCM2-218ENST00000541586 PALMO75781 387 aa29.46■■■□□ 2.31
CCM2-218ENST00000541586 CA8P35219 290 aa29.46■■■□□ 2.31
CCM2-218ENST00000541586 NOMO3P69849 1222 aa29.46■■■□□ 2.31
CCM2-218ENST00000541586 CENPCQ03188 943 aa29.46■■■□□ 2.31
CCM2-218ENST00000541586 SOWAHAQ2M3V2 549 aa29.46■■■□□ 2.31
CCM2-218ENST00000541586 SLC35G2Q8TBE7 412 aa29.46■■■□□ 2.31
CCM2-218ENST00000541586 GDPD5Q8WTR4 605 aa29.46■■■□□ 2.31
CCM2-218ENST00000541586 FAM161BQ96MY7 647 aa29.46■■■□□ 2.31
CCM2-218ENST00000541586 ATP1A1P05023 1023 aaKnown RBP29.45■■■□□ 2.31
CCM2-218ENST00000541586 CD19P15391 556 aa29.45■■■□□ 2.31
CCM2-218ENST00000541586 IFI16Q16666 785 aaKnown RBP29.45■■■□□ 2.31
CCM2-218ENST00000541586 KIAA1841Q6NSI8 718 aa29.45■■■□□ 2.31
CCM2-218ENST00000541586 SUSD3Q96L08 255 aa29.45■■■□□ 2.31
CCM2-218ENST00000541586 OSGEPQ9NPF4 335 aa29.45■■■□□ 2.31
CCM2-218ENST00000541586 JRKLQ9Y4A0 524 aa29.45■■■□□ 2.31
CCM2-218ENST00000541586 GRID2IPA4D2P6 1211 aa29.45■■■□□ 2.3
CCM2-218ENST00000541586 C2CD2LO14523 706 aa29.45■■■□□ 2.3
CCM2-218ENST00000541586 TKTP29401 623 aaKnown RBP29.45■■■□□ 2.3
CCM2-218ENST00000541586 ELAVL2Q12926 359 aaKnown RBP29.45■■■□□ 2.3
CCM2-218ENST00000541586 TTYH1Q9H313 450 aaPredicted RBP29.45■■■□□ 2.3
CCM2-218ENST00000541586 PCDHGC3Q9UN70 934 aa29.45■■■□□ 2.3
CCM2-218ENST00000541586 MYH10P35580 1976 aa29.45■■■□□ 2.3
CCM2-218ENST00000541586 DNAJB1P25685 340 aa29.44■■■□□ 2.3
CCM2-218ENST00000541586 NSFP46459 744 aaKnown RBP29.44■■■□□ 2.3
CCM2-218ENST00000541586 AARSP49588 968 aaKnown RBP eCLIP29.44■■■□□ 2.3
CCM2-218ENST00000541586 USP41Q3LFD5 358 aa29.44■■■□□ 2.3
CCM2-218ENST00000541586 TMC7Q7Z402 723 aa29.44■■■□□ 2.3
CCM2-218ENST00000541586 TPCN2Q8NHX9 752 aa29.44■■■□□ 2.3
CCM2-218ENST00000541586 MICAL1Q8TDZ2 1067 aa29.44■■■□□ 2.3
CCM2-218ENST00000541586 NT5C1AQ9BXI3 368 aa29.44■■■□□ 2.3
CCM2-218ENST00000541586 HUS1O60921 280 aa29.43■■■□□ 2.3
CCM2-218ENST00000541586 SOD2P04179 222 aa29.43■■■□□ 2.3
CCM2-218ENST00000541586 ZNF697Q5TEC3 545 aa29.43■■■□□ 2.3
CCM2-218ENST00000541586 LIMS2Q7Z4I7 341 aa29.43■■■□□ 2.3
CCM2-218ENST00000541586 RHOT2Q8IXI1 618 aa29.43■■■□□ 2.3
CCM2-218ENST00000541586 MCOLN2Q8IZK6 566 aa29.43■■■□□ 2.3
CCM2-218ENST00000541586 ZNF653Q96CK0 615 aa29.43■■■□□ 2.3
CCM2-218ENST00000541586 ATMINO43313 823 aaPredicted RBP29.42■■■□□ 2.3
CCM2-218ENST00000541586 MED7O43513 233 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 LSM8O95777 96 aaKnown RBP29.42■■■□□ 2.3
CCM2-218ENST00000541586 TCEAL1Q15170 157 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 APPL2Q8NEU8 664 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 AUTS2Q8WXX7 1259 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 HEXIM2Q96MH2 286 aaKnown RBP29.42■■■□□ 2.3
CCM2-218ENST00000541586 TTPALQ9BTX7 342 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 GTF3C4Q9UKN8 822 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 COG5Q9UP83 839 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 M0QZQ0 153 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 CYP1A2P05177 515 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 ODC1P11926 461 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 PAX3P23760 479 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 ERVFC1P60507 584 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 AMPD2Q01433 879 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 PAPD7Q5XG87 772 aaKnown RBP29.42■■■□□ 2.3
CCM2-218ENST00000541586 WSCD1Q658N2 575 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 LRRC57Q8N9N7 239 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 KBTBD7Q8WVZ9 684 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 ENTPD7Q9NQZ7 604 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 CHORDC1Q9UHD1 332 aaPredicted RBP29.42■■■□□ 2.3
CCM2-218ENST00000541586 PCDHB8Q9UN66 801 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 L1RE1Q9UN81 338 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 NME7Q9Y5B8 376 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 MRFAP1Q9Y605 127 aa29.42■■■□□ 2.3
CCM2-218ENST00000541586 VDRP11473 427 aa29.41■■■□□ 2.3
CCM2-218ENST00000541586 RTP2Q5QGT7 225 aa29.41■■■□□ 2.3
CCM2-218ENST00000541586 MON1BQ7L1V2 547 aa29.41■■■□□ 2.3
CCM2-218ENST00000541586 TCF25Q9BQ70 676 aa29.41■■■□□ 2.3
CCM2-218ENST00000541586 PRDM12Q9H4Q4 367 aa29.41■■■□□ 2.3
CCM2-218ENST00000541586 TLR9Q9NR96 1032 aa29.41■■■□□ 2.3
CCM2-218ENST00000541586 CTTNBP2NLQ9P2B4 639 aa29.41■■■□□ 2.3
CCM2-218ENST00000541586 LZTS1Q9Y250 596 aa29.41■■■□□ 2.3
CCM2-218ENST00000541586 EFEMP2O95967 443 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 UBE3AQ05086 875 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 GRIN2CQ14957 1233 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 PPP1R2P3Q6NXS1 205 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 UNC93AQ86WB7 457 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 PHF13Q86YI8 300 aaPredicted RBP29.4■■■□□ 2.3
CCM2-218ENST00000541586 TMEM35BQ8NCS4 154 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 OR6B3Q8NGW1 331 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 RIN2Q8WYP3 895 aaPredicted RBP29.4■■■□□ 2.3
CCM2-218ENST00000541586 KIAA1257Q9ULG3 409 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 PLXNA4Q9HCM2 1894 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 SYN3O14994 580 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 FTCDO95954 541 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 FGFR3P22607 806 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 CDH5P33151 784 aaPredicted RBP29.4■■■□□ 2.3
CCM2-218ENST00000541586 HADHBP55084 474 aaKnown RBP29.4■■■□□ 2.3
CCM2-218ENST00000541586 PLPP4Q5VZY2 271 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms