RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PIH1D1Q9NWS0 290 aaKnown RBP4.99□□□□□ -1.61
SNHG1-217ENST00000541578 TERF2IPQ9NYB0 399 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 PCDHB1Q9Y5F3 818 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 PCDHGB2Q9Y5G2 931 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 CUX1P39880 1505 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 ISM1B1AKI9 464 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 OVOL3O00110 214 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 APOL1O14791 398 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 GPANK1O95872 356 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 ELANEP08246 267 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 TYRP14679 529 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 FGFR4P22455 802 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 TGM1P22735 817 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 MAPK9P45984 424 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 KCNJ5P48544 419 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 CXADRP78310 365 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 HSD11B2P80365 405 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 DSC2Q02487 901 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 TARDBPQ13148 414 aaKnown RBP eCLIP4.98□□□□□ -1.61
SNHG1-217ENST00000541578 PLS1Q14651 629 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 CNGA2Q16280 664 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 SLC44A4Q53GD3 710 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 B3GNTL1Q67FW5 361 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-217ENST00000541578 MYCT1Q8N699 235 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 ZNF527Q8NB42 609 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 NUP133Q8WUM0 1156 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 ASB10Q8WXI3 467 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 CAVIN3Q969G5 261 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 RNF31Q96EP0 1072 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 MARS2Q96GW9 593 aaKnown RBP4.98□□□□□ -1.61
SNHG1-217ENST00000541578 TMX4Q9H1E5 349 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-217ENST00000541578 ZHX3Q9H4I2 956 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 WDCPQ9H6R7 721 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 GALNT9Q9HCQ5 603 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 SYBUQ9NX95 663 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 MTO1Q9Y2Z2 717 aaKnown RBP4.98□□□□□ -1.61
SNHG1-217ENST00000541578 DGKBQ9Y6T7 804 aa4.98□□□□□ -1.61
SNHG1-217ENST00000541578 GLI2P10070 1586 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 AATKQ6ZMQ8 1374 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 ADAMTS3O15072 1205 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 NCK2O43639 380 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 PPFIA2O75334 1257 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 FTH1P19P0C7X4 201 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 EGR2P11161 476 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-217ENST00000541578 ITGAMP11215 1152 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 MTHFD1P11586 935 aaKnown RBP4.97□□□□□ -1.61
SNHG1-217ENST00000541578 BMP5P22003 454 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 ZNF543Q08ER8 600 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 DAG1Q14118 895 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 SLC4A8Q2Y0W8 1093 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 GGT6Q6P531 493 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 MMS22LQ6ZRQ5 1243 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 DNAJC10Q8IXB1 793 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 TXLNBQ8N3L3 684 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 PLBD2Q8NHP8 589 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 IL31RAQ8NI17 732 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 TBC1D15Q8TC07 691 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 LINC00476Q8WZB0 136 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 PNKPQ96T60 521 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 SERHLQ9NQF3 203 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 SACM1LQ9NTJ5 587 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 TMEM74BQ9NUR3 256 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 CALCOCO1Q9P1Z2 691 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 TESQ9UGI8 421 aaKnown RBP4.97□□□□□ -1.61
SNHG1-217ENST00000541578 KCNE5Q9UJ90 142 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 PCDHA6Q9UN73 950 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 EPN1Q9Y6I3 576 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-217ENST00000541578 PTPRGP23470 1445 aa4.97□□□□□ -1.61
SNHG1-217ENST00000541578 ADAMTS12P58397 1594 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 DISP3Q9P2K9 1392 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 A0A087WV62 115 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 CCDC78A2IDD5 438 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 CDHR4A6H8M9 788 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 GRM6O15303 877 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 TBC1D4O60343 1298 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 ERN1O75460 977 aaKnown RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 SKAP2O75563 359 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 LMNAP02545 664 aaKnown RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 CENPBP07199 599 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 HSP90AA1P07900 732 aaKnown RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 GNAI3P08754 354 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 SEC24CP53992 1094 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 SUMO3P55854 103 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 GNAI1P63096 354 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 NOMO3P69849 1222 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 PUM3Q15397 648 aaKnown RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 ARL13BQ3SXY8 428 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 PABPC1LQ4VXU2 614 aaKnown RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 NOMO2Q5JPE7 1267 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 OLFML1Q6UWY5 402 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 ANKRD18AQ8IVF6 992 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 NKAPQ8N5F7 415 aaKnown RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 OR6B3Q8NGW1 331 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 IFI44Q8TCB0 444 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 BRI3BPQ8WY22 251 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 TNPO1Q92973 898 aaKnown RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 ZNF566Q969W8 418 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 TMEM41AQ96HV5 264 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 ZC3H10Q96K80 434 aaKnown RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 MED15Q96RN5 788 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms