RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 BTBD6Q96KE9 485 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 SENP8Q96LD8 212 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 UROC1Q96N76 676 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 TRIM7Q9C029 511 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 EHD2Q9NZN4 543 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 TANC1Q9C0D5 1861 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 SCN5AQ14524 2016 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 B3GAT3O94766 335 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 CXCL10P02778 98 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 PDGFRBP09619 1106 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 TCP1P17987 556 aaKnown RBP9.18□□□□□ -0.94
THBS3-210ENST00000541576 WARSP23381 471 aaKnown RBP9.18□□□□□ -0.94
THBS3-210ENST00000541576 SF3A3Q12874 501 aaKnown RBP eCLIP9.18□□□□□ -0.94
THBS3-210ENST00000541576 RPS6KA1Q15418 735 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 NOMO2Q5JPE7 1267 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 LCLAT1Q6UWP7 414 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 DSTYKQ6XUX3 929 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 RSRC2Q7L4I2 434 aaKnown RBP9.18□□□□□ -0.94
THBS3-210ENST00000541576 HDXQ7Z353 690 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 MS4A14Q96JA4 679 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 MYCBPQ99417 103 aaPredicted RBP9.18□□□□□ -0.94
THBS3-210ENST00000541576 TMEM106CQ9BVX2 250 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 FAM107BQ9H098 131 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 DPEP3Q9H4B8 488 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 ELAC1Q9H777 363 aaKnown RBP9.18□□□□□ -0.94
THBS3-210ENST00000541576 TMEM39AQ9NV64 488 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 TSPAN16Q9UKR8 245 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 TBX21Q9UL17 535 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 PCDHB7Q9Y5E2 793 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 MKI67P46013 3256 aaKnown RBP9.18□□□□□ -0.94
THBS3-210ENST00000541576 HCRTO43612 131 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 KIF4AO95239 1232 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 IVLP07476 585 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 FAM163BP0C2L3 166 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 LMO2P25791 158 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 WSCD1Q658N2 575 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 C11orf63Q6NUN7 778 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 CEP112Q8N8E3 955 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 MRPL47Q9HD33 250 aaKnown RBP9.18□□□□□ -0.94
THBS3-210ENST00000541576 FAM49BQ9NUQ9 324 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 KANSL3Q9P2N6 904 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 CYTH4Q9UIA0 394 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 AMFRQ9UKV5 643 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 ALG6Q9Y672 507 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 SCINQ9Y6U3 715 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 TTC3P53804 2025 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 TMEM110-MUSTN1A8MSY1 372 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 CLTBP09497 229 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 AARSP49588 968 aaKnown RBP eCLIP9.18□□□□□ -0.94
THBS3-210ENST00000541576 MESDQ14696 234 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 CASP8Q14790 479 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 PPP1R26Q5T8A7 1209 aaPredicted RBP9.18□□□□□ -0.94
THBS3-210ENST00000541576 DEFB128Q7Z7B8 93 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 OSTM1Q86WC4 334 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 ABI1Q8IZP0 508 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 CRYBG2Q8N1P7 616 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 TMEM86AQ8N2M4 240 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 MSANTD4Q8NCY6 345 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 TNIP3Q96KP6 325 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 LPIN3Q9BQK8 851 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 SYNCQ9H7C4 482 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 LRFN2Q9ULH4 789 aa9.18□□□□□ -0.94
THBS3-210ENST00000541576 ERLIN1O75477 346 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 GJB6O95452 261 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 GPD2P43304 727 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 MAGEA9P43362 315 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 RNASELQ05823 741 aaKnown RBP9.17□□□□□ -0.94
THBS3-210ENST00000541576 MAMLD1Q13495 774 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 LRRC26Q2I0M4 334 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 TCTN1Q2MV58 587 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 GOLGA7BQ2TAP0 167 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 PTPN20Q4JDL3 420 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 PAN2Q504Q3 1202 aaKnown RBP9.17□□□□□ -0.94
THBS3-210ENST00000541576 TIGD5Q53EQ6 642 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 PLEKHA7Q6IQ23 1121 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 LRRC31Q6UY01 552 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 NOA1Q8NC60 698 aaKnown RBP9.17□□□□□ -0.94
THBS3-210ENST00000541576 UBA3Q8TBC4 463 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 HES6Q96HZ4 224 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 PARVAQ9NVD7 372 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 TBC1D13Q9NVG8 400 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 HESX1Q9UBX0 185 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 ANAPC7Q9UJX3 599 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 STRIP2Q9ULQ0 834 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 CTAGE15A4D2H0 777 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 GABRDO14764 452 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 CTAGE8P0CG41 777 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 PAX3P23760 479 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 PDCLQ13371 301 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 ARHGAP17Q68EM7 881 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 DCLRE1AQ6PJP8 1040 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 NECAB2Q7Z6G3 386 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 CTAGE6Q86UF2 777 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 ZNF280BQ86YH2 543 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 CTAGE4Q8IX94 777 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 FAM193BQ96PV7 902 aaPredicted RBP9.17□□□□□ -0.94
THBS3-210ENST00000541576 TJP2Q9UDY2 1190 aa9.17□□□□□ -0.94
THBS3-210ENST00000541576 MYO1FO00160 1098 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 KCNK3O14649 394 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 DDX3YO15523 660 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms