RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 DUS2Q9NX74 493 aaKnown RBP28.84■■■□□ 2.21
CHFR-218ENST00000540963 MAGED2Q9UNF1 606 aaPredicted RBP28.84■■■□□ 2.21
CHFR-218ENST00000540963 ANAPC1Q9H1A4 1944 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 CAVIN2O95810 425 aa28.83■■■□□ 2.21
CHFR-218ENST00000540963 USP17L7P0C7H9 530 aa28.83■■■□□ 2.21
CHFR-218ENST00000540963 MCM6Q14566 821 aa28.83■■■□□ 2.21
CHFR-218ENST00000540963 ZNF77Q15935 545 aa28.83■■■□□ 2.21
CHFR-218ENST00000540963 PSAPL1Q6NUJ1 521 aa28.83■■■□□ 2.21
CHFR-218ENST00000540963 CRELD2Q6UXH1 353 aaPredicted RBP28.83■■■□□ 2.21
CHFR-218ENST00000540963 TMEM86AQ8N2M4 240 aa28.83■■■□□ 2.21
CHFR-218ENST00000540963 FRYQ5TBA9 3013 aa28.82■■■□□ 2.2
CHFR-218ENST00000540963 TADA3O75528 432 aa28.82■■■□□ 2.2
CHFR-218ENST00000540963 BMP15O95972 392 aa28.82■■■□□ 2.2
CHFR-218ENST00000540963 TCF3P15923 654 aa28.82■■■□□ 2.2
CHFR-218ENST00000540963 CREB5Q02930 508 aa28.82■■■□□ 2.2
CHFR-218ENST00000540963 USP4Q13107 963 aa28.82■■■□□ 2.2
CHFR-218ENST00000540963 NR1H3Q13133 447 aa28.82■■■□□ 2.2
CHFR-218ENST00000540963 ZC2HC1CQ53FD0 456 aaPredicted RBP28.82■■■□□ 2.2
CHFR-218ENST00000540963 DAB2IPQ5VWQ8 1189 aa28.82■■■□□ 2.2
CHFR-218ENST00000540963 TRAV19A0A0A6YYK7 116 aa28.81■■■□□ 2.2
CHFR-218ENST00000540963 PLCG1P19174 1290 aa28.81■■■□□ 2.2
CHFR-218ENST00000540963 LONP1P36776 959 aaKnown RBP28.81■■■□□ 2.2
CHFR-218ENST00000540963 IFNAR2P48551 515 aa28.81■■■□□ 2.2
CHFR-218ENST00000540963 GPR15P49685 360 aa28.81■■■□□ 2.2
CHFR-218ENST00000540963 INTS6LQ5JSJ4 861 aaKnown RBP28.81■■■□□ 2.2
CHFR-218ENST00000540963 TCEAL6Q6IPX3 200 aa28.81■■■□□ 2.2
CHFR-218ENST00000540963 PDCL2Q8N4E4 241 aa28.81■■■□□ 2.2
CHFR-218ENST00000540963 POMGNT1Q8WZA1 660 aa28.81■■■□□ 2.2
CHFR-218ENST00000540963 LARP4BQ92615 738 aaKnown RBP28.81■■■□□ 2.2
CHFR-218ENST00000540963 EZH1Q92800 747 aaPredicted RBP28.81■■■□□ 2.2
CHFR-218ENST00000540963 TCEAL3Q969E4 200 aa28.81■■■□□ 2.2
CHFR-218ENST00000540963 POLR3BQ9NW08 1133 aaPredicted RBP28.81■■■□□ 2.2
CHFR-218ENST00000540963 FAM208BQ5VWN6 2430 aa28.8■■■□□ 2.2
CHFR-218ENST00000540963 TISP43B9A030 160 aa28.8■■■□□ 2.2
CHFR-218ENST00000540963 HUS1O60921 280 aa28.8■■■□□ 2.2
CHFR-218ENST00000540963 MYL7Q01449 175 aa28.8■■■□□ 2.2
CHFR-218ENST00000540963 EML3Q32P44 896 aa28.8■■■□□ 2.2
CHFR-218ENST00000540963 CFAP221Q4G0U5 840 aa28.8■■■□□ 2.2
CHFR-218ENST00000540963 ZNF720Q7Z2F6 126 aa28.8■■■□□ 2.2
CHFR-218ENST00000540963 LRRC52Q8N7C0 313 aa28.8■■■□□ 2.2
CHFR-218ENST00000540963 KRI1Q8N9T8 703 aaKnown RBP28.8■■■□□ 2.2
CHFR-218ENST00000540963 FSIP1Q8NA03 581 aa28.8■■■□□ 2.2
CHFR-218ENST00000540963 FUBP3Q96I24 572 aaKnown RBP eCLIP28.8■■■□□ 2.2
CHFR-218ENST00000540963 PKMYT1Q99640 499 aa28.8■■■□□ 2.2
CHFR-218ENST00000540963 THADAQ6YHU6 1953 aa28.8■■■□□ 2.2
CHFR-218ENST00000540963 HELZP42694 1942 aaKnown RBP28.8■■■□□ 2.2
CHFR-218ENST00000540963 ABCA7Q8IZY2 2146 aa28.79■■■□□ 2.2
CHFR-218ENST00000540963 H3BQV1 296 aa28.79■■■□□ 2.2
CHFR-218ENST00000540963 CKMP06732 381 aa28.79■■■□□ 2.2
CHFR-218ENST00000540963 PDE6CP51160 858 aa28.79■■■□□ 2.2
CHFR-218ENST00000540963 NOVA1P51513 510 aaKnown RBP28.79■■■□□ 2.2
CHFR-218ENST00000540963 DDR2Q16832 855 aa28.79■■■□□ 2.2
CHFR-218ENST00000540963 USP39Q53GS9 565 aaKnown RBP28.79■■■□□ 2.2
CHFR-218ENST00000540963 CACTINQ8WUQ7 758 aaKnown RBP28.79■■■□□ 2.2
CHFR-218ENST00000540963 GDAP2Q9NXN4 497 aa28.79■■■□□ 2.2
CHFR-218ENST00000540963 DDX43Q9NXZ2 648 aaKnown RBP28.79■■■□□ 2.2
CHFR-218ENST00000540963 L1RE1Q9UN81 338 aa28.79■■■□□ 2.2
CHFR-218ENST00000540963 LNP1A1A4G5 178 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 DCLK1O15075 740 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 PPP1R37O75864 691 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 PFKLP17858 780 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 CYP2F1P24903 491 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 ADSSP30520 456 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 DDIT3P35638 169 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 PMS2CLQ68D20 193 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 NAIF1Q69YI7 327 aaPredicted RBP28.78■■■□□ 2.2
CHFR-218ENST00000540963 KIAA1958Q8N8K9 716 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 TSTD1Q8NFU3 115 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 RASSF8Q8NHQ8 419 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 CEP295NLQ96MC4 621 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 GCNT4Q9P109 453 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 SEL1LQ9UBV2 794 aa28.78■■■□□ 2.2
CHFR-218ENST00000540963 C4orf47A7E2U8 309 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 GBP1P32455 592 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 DGKEP52429 567 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 PSMD2Q13200 908 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 SDHAF4Q5VUM1 108 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 RASSF3Q86WH2 238 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 BRSK2Q8IWQ3 736 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 STKLD1Q8NE28 680 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 SLC22A12Q96S37 553 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 CYP2S1Q96SQ9 504 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 STRA6Q9BX79 667 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 TRPC7Q9HCX4 862 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 ARHGAP26Q9UNA1 814 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 AGAP1Q9UPQ3 857 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 EXOC7Q9UPT5 735 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 WNT6Q9Y6F9 365 aa28.77■■■□□ 2.2
CHFR-218ENST00000540963 KHNYNO15037 678 aaKnown RBP28.76■■■□□ 2.19
CHFR-218ENST00000540963 NFATC1O95644 943 aa28.76■■■□□ 2.19
CHFR-218ENST00000540963 LDHAP00338 332 aaKnown RBP28.76■■■□□ 2.19
CHFR-218ENST00000540963 CSRP1P21291 193 aaKnown RBP28.76■■■□□ 2.19
CHFR-218ENST00000540963 PCSK1P29120 753 aa28.76■■■□□ 2.19
CHFR-218ENST00000540963 POLR2BP30876 1174 aaKnown RBP28.76■■■□□ 2.19
CHFR-218ENST00000540963 MAGEA11P43364 429 aa28.76■■■□□ 2.19
CHFR-218ENST00000540963 LHX1P48742 406 aa28.76■■■□□ 2.19
CHFR-218ENST00000540963 TFAMQ00059 246 aaKnown RBP28.76■■■□□ 2.19
CHFR-218ENST00000540963 TOP6BLQ8N6T0 577 aa28.76■■■□□ 2.19
CHFR-218ENST00000540963 C1orf127Q8N9H9 656 aa28.76■■■□□ 2.19
CHFR-218ENST00000540963 USP33Q8TEY7 942 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms