RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ZNF233A6NK53 670 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 CDX4O14627 284 aaPredicted RBP8.97□□□□□ -0.97
CHD4-208ENST00000540960 ATXN7O15265 892 aaPredicted RBP8.97□□□□□ -0.97
CHD4-208ENST00000540960 SLC16A4O15374 487 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 ZNF862O60290 1169 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 LILRB3O75022 631 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 ZC3H11AO75152 810 aaKnown RBP eCLIP8.97□□□□□ -0.97
CHD4-208ENST00000540960 STBD1O95210 358 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 PIGRP01833 764 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 RPLP2P05387 115 aaKnown RBP8.97□□□□□ -0.97
CHD4-208ENST00000540960 HOXD13P35453 343 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 TCF7P36402 384 aaPredicted RBP8.97□□□□□ -0.97
CHD4-208ENST00000540960 ARL2P36404 184 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 LIG4P49917 911 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 CYP2J2P51589 502 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 NPEPPSP55786 919 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 NCBP1Q09161 790 aaKnown RBP8.97□□□□□ -0.97
CHD4-208ENST00000540960 PPP2R5DQ14738 602 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 PCBP1Q15365 356 aaKnown RBP eCLIP8.97□□□□□ -0.97
CHD4-208ENST00000540960 UGCGQ16739 394 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 MTERF2Q49AM1 385 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 ZC2HC1CQ53FD0 456 aaPredicted RBP8.97□□□□□ -0.97
CHD4-208ENST00000540960 DAB2IPQ5VWQ8 1189 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 PDXDC1Q6P996 788 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 CCDC60Q8IWA6 550 aaPredicted RBP8.97□□□□□ -0.97
CHD4-208ENST00000540960 REXO1L1PQ8IX06 675 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 MNS1Q8NEH6 495 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 SPATA18Q8TC71 538 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 TRAPPC12Q8WVT3 735 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 ZNF592Q92610 1267 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 SLC35C1Q96A29 364 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 JAKMIP2Q96AA8 810 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 ALS2CR12Q96Q35 445 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 PLA2G2FQ9BZM2 168 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 POLR3FQ9H1D9 316 aaPredicted RBP8.97□□□□□ -0.97
CHD4-208ENST00000540960 SCUBE2Q9NQ36 999 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 HSPBP1Q9NZL4 362 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 ARHGAP28Q9P2N2 729 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 SRPK3Q9UPE1 567 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 GINS2Q9Y248 185 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 UBR5O95071 2799 aaPredicted RBP8.97□□□□□ -0.97
CHD4-208ENST00000540960 NUP205Q92621 2012 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 EVPLQ92817 2033 aa8.97□□□□□ -0.97
CHD4-208ENST00000540960 LNP1A1A4G5 178 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 RRN3P2A6NIE6 340 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 SOWAHDA6NJG2 315 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 HNRNPDLO14979 420 aaKnown RBP8.96□□□□□ -0.98
CHD4-208ENST00000540960 ZBTB39O15060 712 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 CLIC2O15247 247 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 EXTL3O43909 919 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 TACC1O75410 805 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 LCA5LO95447 670 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 UCHL3P15374 230 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 PRKCIP41743 596 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 FMO5P49326 533 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 ALDH7A1P49419 539 aaKnown RBP8.96□□□□□ -0.98
CHD4-208ENST00000540960 VAV2P52735 878 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 POLR2FP61218 127 aaKnown RBP8.96□□□□□ -0.98
CHD4-208ENST00000540960 NTHL1P78549 312 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 MYL7Q01449 175 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 PFKPQ01813 784 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 KLHL30Q0D2K2 578 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 DSC3Q14574 896 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 TARBP2Q15633 366 aaKnown RBP8.96□□□□□ -0.98
CHD4-208ENST00000540960 KLHDC7AQ5VTJ3 777 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 PLA2G4FQ68DD2 849 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 IQCEQ6IPM2 695 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 MAEAQ7L5Y9 396 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 GPD1LQ8N335 351 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 TRIM58Q8NG06 486 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 HELQQ8TDG4 1101 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 POMGNT1Q8WZA1 660 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 IGSF21Q96ID5 467 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 LOXL4Q96JB6 756 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 MAP7D2Q96T17 732 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 MRPL4Q9BYD3 311 aaKnown RBP8.96□□□□□ -0.98
CHD4-208ENST00000540960 NFKBIZQ9BYH8 718 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 STK33Q9BYT3 514 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 RHOBTB2Q9BYZ6 727 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 ADAMTS10Q9H324 1103 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 CCDC86Q9H6F5 360 aaKnown RBP8.96□□□□□ -0.98
CHD4-208ENST00000540960 ELAC1Q9H777 363 aaKnown RBP8.96□□□□□ -0.98
CHD4-208ENST00000540960 PIDD1Q9HB75 910 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 VPS45Q9NRW7 570 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 GCNT4Q9P109 453 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 DNAI1Q9UI46 699 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 INTUQ9ULD6 942 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 NOTCH4Q99466 2003 aa8.96□□□□□ -0.98
CHD4-208ENST00000540960 COL4A2P08572 1712 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 DOPEY2Q9Y3R5 2298 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 ANO9A1A5B4 782 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 LRRC53A6NM62 1247 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 M0QZ92 97 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 RPS6KA5O75582 802 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 SLU7O95391 586 aaKnown RBP8.95□□□□□ -0.98
CHD4-208ENST00000540960 INSRRP14616 1297 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 PON1P27169 355 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 PHKA2P46019 1235 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 PXNP49023 591 aaPredicted RBP8.95□□□□□ -0.98
CHD4-208ENST00000540960 MFAP3P55082 362 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms