RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 CLDND1Q9NY35 253 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 BRWD1Q9NSI6 2320 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 CCDC66A2RUB6 948 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 H3BQ06 376 aaPredicted RBP12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 FGF18O76093 207 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 CLSTN1O94985 981 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 LSM8O95777 96 aaKnown RBP12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 ATICP31939 592 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 ZNF132P52740 706 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 CAMK1Q14012 370 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 DCAF4L1Q3SXM0 396 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 EEF1DP3Q658K8 133 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 SPOPLQ6IQ16 392 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 COLGALT1Q8NBJ5 622 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 PABPC5Q96DU9 382 aaKnown RBP12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 GOLPH3Q9H4A6 298 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 PDZD7Q9H5P4 517 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 SLITRK6Q9H5Y7 841 aa12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 CNOT8Q9UFF9 292 aaKnown RBP12.67□□□□□ -0.38
CYB561A3-215ENST00000540317 GOLGA6L10A0A0M3HER8 536 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 KRIT1O00522 736 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 CST3P01034 146 aaPredicted RBP12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 SKIP12755 728 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 LAG3P18627 525 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 CTNNA2P26232 953 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 SLC1A1P43005 524 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 MYL6P60660 151 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 CBX1P83916 185 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 C1QBPQ07021 282 aaKnown RBP12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 HYAL1Q12794 435 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 ZNF699Q32M78 642 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 LEXMQ3ZCV2 418 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 CLLU1OSQ5K130 101 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 RBM23Q86U06 439 aaKnown RBP12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 PHF13Q86YI8 300 aaPredicted RBP12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 LRRC43Q8N309 656 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 TTC39CQ8N584 583 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 CCDC26Q8TAB7 109 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 ZNF518BQ9C0D4 1074 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 CWH43Q9H720 699 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 MRPL47Q9HD33 250 aaKnown RBP12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 ACP6Q9NPH0 428 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 FAM105AQ9NUU6 356 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 RNF19AQ9NV58 838 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 SMARCAL1Q9NZC9 954 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 EHD2Q9NZN4 543 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 NCOR1O75376 2440 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 NLRC5Q86WI3 1866 aa12.66□□□□□ -0.38
CYB561A3-215ENST00000540317 A0A1B0GUA9 196 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 THAP12O43422 761 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 P4HA1P13674 534 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 ATF7P17544 494 aaPredicted RBP12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 ARF4P18085 180 aaPredicted RBP12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 COMTP21964 271 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 IRS1P35568 1242 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 PBX3P40426 434 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 PLA2G4AP47712 749 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 ALDH7A1P49419 539 aaKnown RBP12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 KRT17Q04695 432 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 UBE3AQ05086 875 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 NNTQ13423 1086 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 MESDQ14696 234 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 CASP8Q14790 479 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 PTCRAQ6ISU1 281 aaPredicted RBP12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 EMBQ6PCB8 327 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 KCNT2Q6UVM3 1135 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 MAATS1Q7Z4T9 603 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 EFCAB13Q8IY85 973 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 LPPQ93052 612 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 ZNF558Q96NG5 402 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 KRT12Q99456 494 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 ZSWIM1Q9BR11 485 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 TRAIPQ9BWF2 469 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 VRTNQ9H8Y1 702 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 PLEKHA5Q9HAU0 1116 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 GDF3Q9NR23 364 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 DERAQ9Y315 318 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 C2CD2Q9Y426 696 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 SCINQ9Y6U3 715 aa12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 TCF20Q9UGU0 1960 aaKnown RBP12.65□□□□□ -0.38
CYB561A3-215ENST00000540317 LACTBL1A8MY62 500 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 MED7O43513 233 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 SPOPO43791 374 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 TSPAN1O60635 241 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 SASH3O75995 380 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 CXCL8P10145 99 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 AXLP30530 894 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 CTNNA1P35221 906 aaKnown RBP12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 GRM5P41594 1212 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 NRIP1P48552 1158 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 RAB27AP51159 221 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 NOMO3P69849 1222 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 FAM193AP78312 1265 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 RNASELQ05823 741 aaKnown RBP12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 ZNF667Q5HYK9 610 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 SEL1L2Q5TEA6 688 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 NAA35Q5VZE5 725 aa12.64□□□□□ -0.39
CYB561A3-215ENST00000540317 GLB1LQ6UWU2 654 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms