RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 NCOR1O75376 2440 aa14.31□□□□□ -0.12
PRPF19-204ENST00000539960 CILPO75339 1184 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 MYL4P12829 197 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 CD58P19256 250 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 MTIF2P46199 727 aaKnown RBP14.3□□□□□ -0.12
PRPF19-204ENST00000539960 TYRO3Q06418 890 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 LRMPQ12912 555 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 DDR2Q16832 855 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 SLC5A9Q2M3M2 681 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 PRSS36Q5K4E3 855 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 VSTM1Q6UX27 236 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 C11orf57Q6ZUT1 292 aaPredicted RBP14.3□□□□□ -0.12
PRPF19-204ENST00000539960 PDZD4Q76G19 769 aaPredicted RBP14.3□□□□□ -0.12
PRPF19-204ENST00000539960 GET4Q7L5D6 327 aaPredicted RBP14.3□□□□□ -0.12
PRPF19-204ENST00000539960 SCN4BQ8IWT1 228 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 GPR152Q8TDT2 470 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 WHAMMQ8TF30 809 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 FGF13Q92913 245 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 NT5C1AQ9BXI3 368 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 ASAH2Q9NR71 780 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 CISHQ9NSE2 258 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 EPS15L1Q9UBC2 864 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 HMGXB4Q9UGU5 601 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 CDH7Q9ULB5 785 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 NFE2L3Q9Y4A8 694 aa14.3□□□□□ -0.12
PRPF19-204ENST00000539960 GRIK1P39086 918 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 CCR2P41597 374 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 GPR15P49685 360 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 ORC1Q13415 861 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 CUL2Q13617 745 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 TAF12Q16514 161 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 SKOR2Q2VWA4 1001 aaPredicted RBP14.29□□□□□ -0.12
PRPF19-204ENST00000539960 HSP90AA4PQ58FG1 418 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 SDHAF4Q5VUM1 108 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 PAQR9Q6ZVX9 377 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 TCEAL4Q96EI5 215 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 NT5C1BQ96P26 610 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 ARID3AQ99856 593 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 TUBGCP2Q9BSJ2 902 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 ELOVL4Q9GZR5 314 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 DNAI2Q9GZS0 605 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 GDE1Q9NZC3 331 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 VCANP13611 3396 aa14.29□□□□□ -0.12
PRPF19-204ENST00000539960 SLC38A8A6NNN8 435 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 KCNJ18B7U540 433 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 CLDN5O00501 218 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 MOSPD3O75425 235 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 FGF19O95750 216 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 CSH1P0DML2 217 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 CSH2P0DML3 217 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 HMGA1P17096 107 aaKnown RBP14.28□□□□□ -0.12
PRPF19-204ENST00000539960 TRIM21P19474 475 aaKnown RBP14.28□□□□□ -0.12
PRPF19-204ENST00000539960 TBXAS1P24557 533 aaPredicted RBP14.28□□□□□ -0.12
PRPF19-204ENST00000539960 KCNJ12Q14500 433 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 MAN2A1Q16706 1144 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 VWA3BQ502W6 1294 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 TCP11X2Q5H9J9 407 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 GAREM2Q75VX8 874 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 TMC8Q8IU68 726 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 NPAS3Q8IXF0 933 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 FUKQ8N0W3 1084 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 C12orf29Q8N999 325 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 ING5Q8WYH8 240 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 KHSRPQ92945 711 aaKnown RBP eCLIP14.28□□□□□ -0.12
PRPF19-204ENST00000539960 MCRS1Q96EZ8 462 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 SPATA17Q96L03 361 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 C8orf48Q96LL4 319 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 CEP295NLQ96MC4 621 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 TWNKQ96RR1 684 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 ZNF518BQ9C0D4 1074 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 INTS2Q9H0H0 1204 aaKnown RBP14.28□□□□□ -0.12
PRPF19-204ENST00000539960 ZNF334Q9HCZ1 680 aaPredicted RBP14.28□□□□□ -0.12
PRPF19-204ENST00000539960 FANCLQ9NW38 375 aa14.28□□□□□ -0.12
PRPF19-204ENST00000539960 ATP8B3O60423 1300 aa14.27□□□□□ -0.12
PRPF19-204ENST00000539960 GTPBP10A4D1E9 387 aaKnown RBP14.27□□□□□ -0.13
PRPF19-204ENST00000539960 F8VP50 259 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 NRG2O14511 850 aaPredicted RBP14.27□□□□□ -0.13
PRPF19-204ENST00000539960 TRIM66O15016 1216 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 PRKCSHP14314 528 aaPredicted RBP14.27□□□□□ -0.13
PRPF19-204ENST00000539960 GJA1P17302 382 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 CEBPBP17676 345 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 EEF1GP26641 437 aaKnown RBP14.27□□□□□ -0.13
PRPF19-204ENST00000539960 RAD23BP54727 409 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 YWHAEP62258 255 aaKnown RBP14.27□□□□□ -0.13
PRPF19-204ENST00000539960 MYL5Q02045 173 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 MTMR3Q13615 1198 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 ZNF394Q53GI3 561 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 CDKAL1Q5VV42 579 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 PHLDB3Q6NSJ2 640 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 POTEHQ6S545 545 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 GBP6Q6ZN66 633 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 PPM1KQ8N3J5 372 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 SLC4A11Q8NBS3 891 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 SHKBP1Q8TBC3 707 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 NXPE3Q969Y0 559 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 CYFIP2Q96F07 1278 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 TMEM176AQ96HP8 235 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 MYRFLQ96LU7 910 aa14.27□□□□□ -0.13
PRPF19-204ENST00000539960 HEXIM2Q96MH2 286 aaKnown RBP14.27□□□□□ -0.13
PRPF19-204ENST00000539960 HNRNPABQ99729 332 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms