RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 PACSIN2Q9UNF0 486 aaPredicted RBP6.67□□□□□ -1.34
MDM2-225ENST00000539479 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.67□□□□□ -1.34
MDM2-225ENST00000539479 INPP5FQ9Y2H2 1132 aa6.67□□□□□ -1.34
MDM2-225ENST00000539479 HYOU1Q9Y4L1 999 aa6.67□□□□□ -1.34
MDM2-225ENST00000539479 SNX9Q9Y5X1 595 aa6.67□□□□□ -1.34
MDM2-225ENST00000539479 TDRD15B5MCY1 1934 aaKnown RBP6.67□□□□□ -1.34
MDM2-225ENST00000539479 COL4A4P53420 1690 aaPredicted RBP6.67□□□□□ -1.34
MDM2-225ENST00000539479 NLRC5Q86WI3 1866 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 A0A0A6YYK5 440 aaPredicted RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 ANKRD62A6NC57 917 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 GOLGA6L9A6NEM1 432 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 KPNA7A9QM74 516 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 ENC1O14682 589 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 KIAA0355O15063 1070 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 ZNF185O15231 689 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 DDX3YO15523 660 aaKnown RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 THAP12O43422 761 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 NRDCO43847 1150 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 SRGAP2O75044 1071 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 RTN2O75298 545 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 TACC1O75410 805 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 PALMO75781 387 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 FTCDO95954 541 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 ERBB2P04626 1255 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 THP07101 528 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 PAEPP09466 180 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 LINC00271P0C7V0 271 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 CCDC130P13994 396 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 ZSCAN20P17040 1043 aaPredicted RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 MMP8P22894 467 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 WARSP23381 471 aaKnown RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 RRM1P23921 792 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 GPD2P43304 727 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 MARCKSL1P49006 195 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 TAF6P49848 677 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 RAB27AP51159 221 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 HADHBP55084 474 aaKnown RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 DEFB103AP81534 67 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 NCBP1Q09161 790 aaKnown RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 GRIK3Q13003 919 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 BFSP2Q13515 415 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 SPA17Q15506 151 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 PKN2Q16513 984 aaKnown RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 PAN2Q504Q3 1202 aaKnown RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 RAB6CQ53S08 254 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 PPP1R26Q5T8A7 1209 aaPredicted RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 DAB2IPQ5VWQ8 1189 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 PAPD7Q5XG87 772 aaKnown RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 SLC24A5Q71RS6 500 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 APBB1IPQ7Z5R6 666 aaPredicted RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 ANKS1BQ7Z6G8 1248 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 DEFB128Q7Z7B8 93 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 ACOT1Q86TX2 421 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 NT5DC3Q86UY8 548 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 PHF13Q86YI8 300 aaPredicted RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 CRYBG2Q8N1P7 616 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 ARFGAP1Q8N6T3 406 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 ZMIZ2Q8NF64 920 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 SLC35G2Q8TBE7 412 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 HASPINQ8TF76 798 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 COG1Q8WTW3 980 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 RFFLQ8WZ73 363 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 CD101Q93033 1021 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 TMEM176AQ96HP8 235 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 SENP8Q96LD8 212 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 FAM81BQ96LP2 452 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 TSPAN18Q96SJ8 248 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 CPXM1Q96SM3 734 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 VN1R3Q9BXE9 311 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 RAB6CQ9H0N0 254 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 NRDE2Q9H7Z3 1164 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 TBC1D13Q9NVG8 400 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 TMLHEQ9NVH6 421 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 EHD2Q9NZN4 543 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 ATP11BQ9Y2G3 1177 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 TIMM13Q9Y5L4 95 aaPredicted RBP6.66□□□□□ -1.34
MDM2-225ENST00000539479 MRFAP1Q9Y605 127 aa6.66□□□□□ -1.34
MDM2-225ENST00000539479 M0QZQ0 153 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 CLDN5O00501 218 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 CYB561D2O14569 222 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 CCP110O43303 1012 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 KRT86O43790 486 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 BEST1O76090 585 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 VNN2O95498 520 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 EOMESO95936 686 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 CYP11A1P05108 521 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 CLTBP09497 229 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 PDGFRBP09619 1106 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 CSF2RAP15509 400 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 TCF4P15884 667 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 ACAT1P24752 427 aaKnown RBP6.65□□□□□ -1.34
MDM2-225ENST00000539479 PBX3P40426 434 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 RPL34P49207 117 aaKnown RBP6.65□□□□□ -1.34
MDM2-225ENST00000539479 SLC11A1P49279 550 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 PSMC1P62191 440 aaKnown RBP6.65□□□□□ -1.34
MDM2-225ENST00000539479 TNNC1P63316 161 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 KIF5AQ12840 1032 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 TUSC3Q13454 348 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 CNGA2Q16280 664 aa6.65□□□□□ -1.34
MDM2-225ENST00000539479 ARHGAP29Q52LW3 1261 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms