RNA–Protein interactions for RNA: ENST00000539463.1

DENR-204, Transcript of density regulated re-initiation and release factor, human

TSL 2

Gene DENR, Length 671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENR-204	ENST00000539463	F11	P03951	625 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	MAGEA11	P43364	429 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	VAMP7	P51809	220 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	NLRP12	P59046	1061 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	ADAM9	Q13443	819 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	MAPRE1	Q15691	268 aa	Known RBP	27.59	■■■□□ 2.01
DENR-204	ENST00000539463	ZNF699	Q32M78	642 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	SV2A	Q7L0J3	742 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	CCDC105	Q8IYK2	499 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	SPATA20	Q8TB22	786 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	ELMO3	Q96BJ8	720 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	GCNA	Q96QF7	691 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	FOXQ1	Q9C009	403 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	MAGED2	Q9UNF1	606 aa	Predicted RBP	27.59	■■■□□ 2.01
DENR-204	ENST00000539463	SIT1	Q9Y3P8	196 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	PCDHA5	Q9Y5H7	936 aa		27.59	■■■□□ 2.01
DENR-204	ENST00000539463	NOL4	O94818	638 aa		27.58	■■■□□ 2.01
DENR-204	ENST00000539463	SMC2	O95347	1197 aa		27.58	■■■□□ 2.01
DENR-204	ENST00000539463	GDI1	P31150	447 aa		27.58	■■■□□ 2.01
DENR-204	ENST00000539463	PSMC2	P35998	433 aa	Known RBP	27.58	■■■□□ 2.01
DENR-204	ENST00000539463	PRCP	P42785	496 aa		27.58	■■■□□ 2.01
DENR-204	ENST00000539463	SGSM1	Q2NKQ1	1148 aa		27.58	■■■□□ 2.01
DENR-204	ENST00000539463	ZNF658	Q5TYW1	1059 aa	Predicted RBP	27.58	■■■□□ 2.01
DENR-204	ENST00000539463	INTS8	Q75QN2	995 aa	Known RBP	27.58	■■■□□ 2.01
DENR-204	ENST00000539463	SCN4B	Q8IWT1	228 aa		27.58	■■■□□ 2.01
DENR-204	ENST00000539463	DNASE1L2	Q92874	299 aa		27.58	■■■□□ 2.01
DENR-204	ENST00000539463	ERCC4	Q92889	916 aa	Predicted RBP	27.58	■■■□□ 2.01
DENR-204	ENST00000539463	PCED1B	Q96HM7	432 aa		27.58	■■■□□ 2.01
DENR-204	ENST00000539463	SLC46A2	Q9BY10	475 aa		27.58	■■■□□ 2.01
DENR-204	ENST00000539463	KANSL1L	A0AUZ9	987 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	SLC38A8	A6NNN8	435 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463		H0Y858	1186 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	BDNF	P23560	247 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	WEE1	P30291	646 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	CDH8	P55286	799 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	CYP27A1	Q02318	531 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	EDRF1	Q3B7T1	1238 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	ZNF667	Q5HYK9	610 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	MDH1B	Q5I0G3	518 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	FAM186B	Q8IYM0	893 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	DTWD2	Q8NBA8	298 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	PJA1	Q8NG27	643 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	IRF7	Q92985	503 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	SMARCE1	Q969G3	411 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	MYRFL	Q96LU7	910 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	LRRC3B	Q96PB8	259 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	DPEP3	Q9H4B8	488 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	SMYD3	Q9H7B4	428 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	HEBP1	Q9NRV9	189 aa		27.57	■■■□□ 2
DENR-204	ENST00000539463	HOOK1	Q9UJC3	728 aa	Known RBP	27.57	■■■□□ 2
DENR-204	ENST00000539463	COL4A3	Q01955	1670 aa		27.56	■■■□□ 2
DENR-204	ENST00000539463	DCN	P07585	359 aa	Known RBP	27.56	■■■□□ 2
DENR-204	ENST00000539463	PTPN1	P18031	435 aa	Known RBP	27.56	■■■□□ 2
DENR-204	ENST00000539463	ENPEP	Q07075	957 aa		27.56	■■■□□ 2
DENR-204	ENST00000539463	COBLL1	Q53SF7	1204 aa		27.56	■■■□□ 2
DENR-204	ENST00000539463	VSTM1	Q6UX27	236 aa		27.56	■■■□□ 2
DENR-204	ENST00000539463	TRMT2B	Q96GJ1	504 aa	Known RBP	27.56	■■■□□ 2
DENR-204	ENST00000539463	IRF2BPL	Q9H1B7	796 aa		27.56	■■■□□ 2
DENR-204	ENST00000539463	TRPV5	Q9NQA5	729 aa		27.56	■■■□□ 2
DENR-204	ENST00000539463		A8MXQ7	604 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	ZNF263	O14978	683 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	GADD45B	O75293	160 aa	Predicted RBP	27.55	■■■□□ 2
DENR-204	ENST00000539463	CLSTN1	O94985	981 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	TRIM49	P0CI25	452 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	TRIM49C	P0CI26	452 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	KRT13	P13646	458 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	CD72	P21854	359 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	RAP1GAP	P47736	663 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	FCHO2	Q0JRZ9	810 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	TPRG1	Q6ZUI0	275 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	ELOA2	Q8IYF1	753 aa	Predicted RBP	27.55	■■■□□ 2
DENR-204	ENST00000539463	TAF4B	Q92750	862 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	EEF2KMT	Q96G04	330 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	SPATA17	Q96L03	361 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	SDCBP2	Q9H190	292 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	DLGAP2	Q9P1A6	1054 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	UXT	Q9UBK9	157 aa	Predicted RBP	27.55	■■■□□ 2
DENR-204	ENST00000539463	ZMYM5	Q9UJ78	669 aa		27.55	■■■□□ 2
DENR-204	ENST00000539463	PRAMEF12	O95522	483 aa		27.54	■■■□□ 2
DENR-204	ENST00000539463	HLA-DRA	P01903	254 aa		27.54	■■■□□ 2
DENR-204	ENST00000539463	GRIK1	P39086	918 aa		27.54	■■■□□ 2
DENR-204	ENST00000539463	MCCD1	P59942	119 aa	Predicted RBP	27.54	■■■□□ 2
DENR-204	ENST00000539463	PPP3CA	Q08209	521 aa		27.54	■■■□□ 2
DENR-204	ENST00000539463	SCARA5	Q6ZMJ2	495 aa		27.54	■■■□□ 2
DENR-204	ENST00000539463	YAF2	Q8IY57	180 aa		27.54	■■■□□ 2
DENR-204	ENST00000539463	CMTM8	Q8IZV2	173 aa		27.54	■■■□□ 2
DENR-204	ENST00000539463	MAB21L3	Q8N8X9	362 aa		27.54	■■■□□ 2
DENR-204	ENST00000539463	B3GALNT2	Q8NCR0	500 aa		27.54	■■■□□ 2
DENR-204	ENST00000539463	OBP2A	Q9NY56	170 aa		27.54	■■■□□ 2
DENR-204	ENST00000539463	MTF2	Q9Y483	593 aa	Predicted RBP	27.54	■■■□□ 2
DENR-204	ENST00000539463	SHISA7	A6NL88	538 aa		27.53	■■■□□ 2
DENR-204	ENST00000539463	ARNTL	O00327	626 aa		27.53	■■■□□ 2
DENR-204	ENST00000539463	DPYSL4	O14531	572 aa		27.53	■■■□□ 2
DENR-204	ENST00000539463	LRRN2	O75325	713 aa		27.53	■■■□□ 2
DENR-204	ENST00000539463	TADA3	O75528	432 aa		27.53	■■■□□ 2
DENR-204	ENST00000539463	ASS1	P00966	412 aa	Known RBP	27.53	■■■□□ 2
DENR-204	ENST00000539463	GLUL	P15104	373 aa		27.53	■■■□□ 2
DENR-204	ENST00000539463	DDX6	P26196	483 aa	Known RBP eCLIP	27.53	■■■□□ 2
DENR-204	ENST00000539463	HOXD11	P31277	338 aa	Predicted RBP	27.53	■■■□□ 2
DENR-204	ENST00000539463	PIK3CA	P42336	1068 aa		27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms