RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 TUBGCP4Q9UGJ1 667 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 GIT1Q9Y2X7 761 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 FNDC1Q4ZHG4 1894 aaPredicted RBP9.36□□□□□ -0.91
DDB1-213ENST00000539332 SRRM3A6NNA2 597 aaPredicted RBP9.36□□□□□ -0.91
DDB1-213ENST00000539332 PPEF2O14830 753 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 ZNF185O15231 689 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 EIF3HO15372 352 aaKnown RBP eCLIP9.36□□□□□ -0.91
DDB1-213ENST00000539332 THAP12O43422 761 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 KIAA0754O94854 1291 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 CD58P19256 250 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 MMP8P22894 467 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 RAP1GAPP47736 663 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 AFF1P51825 1210 aaKnown RBP9.36□□□□□ -0.91
DDB1-213ENST00000539332 MYO1EQ12965 1108 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 NAA35Q5VZE5 725 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 C9orf57Q5W0N0 161 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 ALS2CLQ60I27 953 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 MFSD5Q6N075 450 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 PEX26Q7Z412 305 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 YTHDF3Q7Z739 585 aaKnown RBP9.36□□□□□ -0.91
DDB1-213ENST00000539332 DAAM2Q86T65 1068 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 NOA1Q8NC60 698 aaKnown RBP9.36□□□□□ -0.91
DDB1-213ENST00000539332 ZNF564Q8TBZ8 553 aaPredicted RBP9.36□□□□□ -0.91
DDB1-213ENST00000539332 TFAP2BQ92481 460 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 CD101Q93033 1021 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 TWNKQ96RR1 684 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 RPS6KC1Q96S38 1066 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 CAPS2Q9BXY5 557 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 ELOVL4Q9GZR5 314 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 LHX5Q9H2C1 402 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 GOLPH3Q9H4A6 298 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 RSAD1Q9HA92 442 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 UBN1Q9NPG3 1134 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 GDAP2Q9NXN4 497 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 NXF1Q9UBU9 619 aaKnown RBP9.36□□□□□ -0.91
DDB1-213ENST00000539332 BARX2Q9UMQ3 279 aaPredicted RBP9.36□□□□□ -0.91
DDB1-213ENST00000539332 FAM169AQ9Y6X4 670 aa9.36□□□□□ -0.91
DDB1-213ENST00000539332 PATJQ8NI35 1801 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 TCRBV5S1A1TA0A578 114 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 DDX3YO15523 660 aaKnown RBP9.35□□□□□ -0.91
DDB1-213ENST00000539332 ATMINO43313 823 aaPredicted RBP9.35□□□□□ -0.91
DDB1-213ENST00000539332 CSF2RAP15509 400 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 NSFP46459 744 aaKnown RBP9.35□□□□□ -0.91
DDB1-213ENST00000539332 IRAK1P51617 712 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 CDH8P55286 799 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 TNNC1P63316 161 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 SKOR1P84550 965 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 SOX4Q06945 474 aaPredicted RBP9.35□□□□□ -0.91
DDB1-213ENST00000539332 NNTQ13423 1086 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 RPS6KA1Q15418 735 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 COL13A1Q5TAT6 717 aaPredicted RBP9.35□□□□□ -0.91
DDB1-213ENST00000539332 PLEKHA7Q6IQ23 1121 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 CNKSR3Q6P9H4 555 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 GLB1LQ6UWU2 654 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 CCNI2Q6ZMN8 369 aaPredicted RBP9.35□□□□□ -0.91
DDB1-213ENST00000539332 CRIPAKQ8N1N5 446 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 RASGEF1CQ8N431 466 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 CPA5Q8WXQ8 436 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 PBKQ96KB5 322 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 ZNF560Q96MR9 790 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 NUP85Q9BW27 656 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 SLC38A7Q9NVC3 462 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 TMEM161AQ9NX61 479 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 CTTNBP2NLQ9P2B4 639 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 CNOT8Q9UFF9 292 aaKnown RBP9.35□□□□□ -0.91
DDB1-213ENST00000539332 HMGXB4Q9UGU5 601 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 GGA2Q9UJY4 613 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 AMFRQ9UKV5 643 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 TTC7AQ9ULT0 858 aaPredicted RBP9.35□□□□□ -0.91
DDB1-213ENST00000539332 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.35□□□□□ -0.91
DDB1-213ENST00000539332 MIF4GDA9UHW6 222 aaKnown RBP9.35□□□□□ -0.91
DDB1-213ENST00000539332 INPPL1O15357 1258 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 MED7O43513 233 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 THP07101 528 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 VDRP11473 427 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 PNPLA4P41247 253 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 SCNN1GP51170 649 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 MNAT1P51948 309 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 IKBKEQ14164 716 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 CLLU1OSQ5K130 101 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 EMBQ6PCB8 327 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 MMGT1Q8N4V1 131 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 TMEM199Q8N511 208 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 TMEM35BQ8NCS4 154 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 TMEM176AQ96HP8 235 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 ABHD8Q96I13 439 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 CAPZA3Q96KX2 299 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 SELENOOQ9BVL4 669 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 CXorf56Q9H5V9 222 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 ELAC1Q9H777 363 aaKnown RBP9.35□□□□□ -0.91
DDB1-213ENST00000539332 GOLGA2P5Q9HBQ8 144 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 MIOSQ9NXC5 875 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 PCDH10Q9P2E7 1040 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 TMEM59LQ9UK28 342 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 KIAA1257Q9ULG3 409 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 PACSIN2Q9UNF0 486 aaPredicted RBP9.35□□□□□ -0.91
DDB1-213ENST00000539332 INPP5FQ9Y2H2 1132 aa9.35□□□□□ -0.91
DDB1-213ENST00000539332 NLRC5Q86WI3 1866 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 PTPRSQ13332 1948 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 O00370 1275 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms