RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 RC3H2Q9HBD1 1191 aaKnown RBP16.32■□□□□ 0.2
VAMP1-207ENST00000539047 MRPL47Q9HD33 250 aaKnown RBP16.32■□□□□ 0.2
VAMP1-207ENST00000539047 MARCH5Q9NX47 278 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 TAS2R14Q9NYV8 317 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 SPG21Q9NZD8 308 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 CTTNBP2NLQ9P2B4 639 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 GTF3C4Q9UKN8 822 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 RWDD3Q9Y3V2 267 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 OR6C75A6NL08 312 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 F8W810 466 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 TLL1O43897 1013 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 FAM200BP0CF97 657 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 CCDC130P13994 396 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 ARHGAP25P42331 645 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 GNG11P61952 73 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 HTRA4P83105 476 aaPredicted RBP16.31■□□□□ 0.2
VAMP1-207ENST00000539047 USP41Q3LFD5 358 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 CTXN3Q4LDR2 81 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 VARS2Q5ST30 1063 aaKnown RBP16.31■□□□□ 0.2
VAMP1-207ENST00000539047 TMCO2Q7Z6W1 182 aaPredicted RBP16.31■□□□□ 0.2
VAMP1-207ENST00000539047 MCOLN2Q8IZK6 566 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 C12orf29Q8N999 325 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 ANKRD52Q8NB46 1076 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 TRIM58Q8NG06 486 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 MYCBPAPQ8TBZ2 947 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 SLC2A14Q8TDB8 520 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 IGSF21Q96ID5 467 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 RAD9AQ99638 391 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 HNRNPABQ99729 332 aaKnown RBP16.31■□□□□ 0.2
VAMP1-207ENST00000539047 TTPALQ9BTX7 342 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 LACRTQ9GZZ8 138 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 THAP2Q9H0W7 228 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 ST7Q9NRC1 585 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 WDR35Q9P2L0 1181 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 UVRAGQ9P2Y5 699 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 HCSTQ9UBK5 93 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 CNOT8Q9UFF9 292 aaKnown RBP16.31■□□□□ 0.2
VAMP1-207ENST00000539047 LCMT1Q9UIC8 334 aa16.31■□□□□ 0.2
VAMP1-207ENST00000539047 MRPL42Q9Y6G3 142 aaKnown RBP16.31■□□□□ 0.2
VAMP1-207ENST00000539047 PTPRDP23468 1912 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 NT5C1B-RDH14C9J2C7 533 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 OAZ2O95190 189 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 TNNT1P13805 278 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 FGFR3P22607 806 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 PBX3P40426 434 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 EPHB4P54760 987 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 PLCB3Q01970 1234 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 KRT17Q04695 432 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 PDCLQ13371 301 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 NFE2Q16621 373 aaPredicted RBP16.3■□□□□ 0.2
VAMP1-207ENST00000539047 ZNF569Q5MCW4 686 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 MMS22LQ6ZRQ5 1243 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 NYAP1Q6ZVC0 841 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 MON1BQ7L1V2 547 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 SPATA2LQ8IUW3 424 aaPredicted RBP16.3■□□□□ 0.2
VAMP1-207ENST00000539047 SYCE1Q8N0S2 351 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 SMARCD1Q96GM5 515 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 RNPC3Q96LT9 517 aaKnown RBP16.3■□□□□ 0.2
VAMP1-207ENST00000539047 ZSWIM1Q9BR11 485 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 AVENQ9NQS1 362 aaPredicted RBP16.3■□□□□ 0.2
VAMP1-207ENST00000539047 KRT82Q9NSB4 513 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 TRIM10Q9UDY6 481 aa16.3■□□□□ 0.2
VAMP1-207ENST00000539047 PATJQ8NI35 1801 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 SZT2Q5T011 3432 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 RCCD1A6NED2 376 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 HCRTO43612 131 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 URODP06132 367 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 CFHP08603 1231 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 CPB1P15086 417 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 DESP17661 470 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 MMP8P22894 467 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 IGFBP6P24592 240 aaPredicted RBP16.29■□□□□ 0.2
VAMP1-207ENST00000539047 ACADSBP45954 432 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 ETF1P62495 437 aaKnown RBP16.29■□□□□ 0.2
VAMP1-207ENST00000539047 CREMQ03060 361 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 TAP1Q03518 808 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 SMARCB1Q12824 385 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 DNAJC24Q6P3W2 148 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 FAM35AQ86V20 835 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 SLC39A11Q8N1S5 342 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 UBA3Q8TBC4 463 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 STK32AQ8WU08 396 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 MYLPFQ96A32 169 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 C18orf8Q96DM3 657 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 HERC2P3Q9BVR0 1158 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 GPR62Q9BZJ7 368 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 CYLDQ9NQC7 956 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 PARVAQ9NVD7 372 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 CXXC1Q9P0U4 656 aaPredicted RBP16.29■□□□□ 0.2
VAMP1-207ENST00000539047 TFR2Q9UP52 801 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 NME7Q9Y5B8 376 aa16.29■□□□□ 0.2
VAMP1-207ENST00000539047 FAM170AA1A519 330 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 XPO1O14980 1071 aaKnown RBP16.28■□□□□ 0.2
VAMP1-207ENST00000539047 BUB1O43683 1085 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 ATP2C2O75185 946 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 AP1G2O75843 785 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 MOCS3O95396 460 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 CYP1A2P05177 515 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 NPR3P17342 541 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 CASQ1P31415 396 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms