RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 SPATA6Q9NWH7 488 aaPredicted RBP16.03■□□□□ 0.16
RAB40B-202ENST00000538809 PIAS3Q9Y6X2 628 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 R4GN57 208 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 ARNTLO00327 626 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 CLSTN1O94985 981 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 ZNF202O95125 648 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 PDGFRBP09619 1106 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 SOX9P48436 509 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 NLRP12P59046 1061 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 DPH6Q7L8W6 267 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 SLC9A9Q8IVB4 645 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 SCN4BQ8IWT1 228 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 TTC8Q8TAM2 541 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 MYLPFQ96A32 169 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 E2F7Q96AV8 911 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 MRPL45Q9BRJ2 306 aaKnown RBP16.02■□□□□ 0.16
RAB40B-202ENST00000538809 OSBPL6Q9BZF3 934 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 ABCB6Q9NP58 842 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 CRTAC1Q9NQ79 661 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 NME7Q9Y5B8 376 aa16.02■□□□□ 0.16
RAB40B-202ENST00000538809 SLC38A8A6NNN8 435 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 LRRIQ3A6PVS8 624 aaPredicted RBP16.01■□□□□ 0.15
RAB40B-202ENST00000538809 PDXKO00764 312 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 TADA3O75528 432 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 F11P03951 625 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 SP9P0CG40 484 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 CSH1P0DML2 217 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 CSH2P0DML3 217 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 WARSP23381 471 aaKnown RBP16.01■□□□□ 0.15
RAB40B-202ENST00000538809 MYL6P60660 151 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 RPL10AP62906 217 aaKnown RBP16.01■□□□□ 0.15
RAB40B-202ENST00000538809 TNNC1P63316 161 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 FCHO2Q0JRZ9 810 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 TRPC3Q13507 836 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 MAML2Q8IZL2 1156 aaPredicted RBP16.01■□□□□ 0.15
RAB40B-202ENST00000538809 MAB21L3Q8N8X9 362 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 GOLGA5Q8TBA6 731 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 CSGALNACT1Q8TDX6 532 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 NKD2Q969F2 451 aaPredicted RBP16.01■□□□□ 0.15
RAB40B-202ENST00000538809 ELMO3Q96BJ8 720 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 SLC46A2Q9BY10 475 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 CDH9Q9ULB4 789 aa16.01■□□□□ 0.15
RAB40B-202ENST00000538809 MRPS17Q9Y2R5 130 aaKnown RBP16.01■□□□□ 0.15
RAB40B-202ENST00000538809 PTPRZ1P23471 2315 aaPredicted RBP16■□□□□ 0.15
RAB40B-202ENST00000538809 CFAP54Q96N23 3096 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 MYOFQ9NZM1 2061 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 CHADO15335 359 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 LAMTOR5O43504 91 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 PHACTR2O75167 634 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 NOL4O94818 638 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 NR3C1P04150 777 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 CCNE1P24864 410 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 CLDN10P78369 228 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 CYP27A1Q02318 531 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 FZD5Q13467 585 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 BIRC3Q13489 604 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 KCNB1Q14721 858 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 WDR72Q3MJ13 1102 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 CFAP221Q4G0U5 840 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 MDH1BQ5I0G3 518 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 TDRD10Q5VZ19 366 aaKnown RBP16■□□□□ 0.15
RAB40B-202ENST00000538809 TXNDC8Q6A555 127 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 FAM171BQ6P995 826 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 SCARA5Q6ZMJ2 495 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 C4orf50Q6ZRC1 276 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 FMR1NBQ8N0W7 255 aaPredicted RBP16■□□□□ 0.15
RAB40B-202ENST00000538809 ENGASEQ8NFI3 743 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 OR6B3Q8NGW1 331 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 BPIFB1Q8TDL5 484 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 FAM3CQ92520 227 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 CLDN23Q96B33 292 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 FUBP3Q96I24 572 aaKnown RBP eCLIP16■□□□□ 0.15
RAB40B-202ENST00000538809 SNX25Q9H3E2 840 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 DPEP3Q9H4B8 488 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 TRPV5Q9NQA5 729 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 MAGEC2Q9UBF1 373 aaPredicted RBP16■□□□□ 0.15
RAB40B-202ENST00000538809 NXF1Q9UBU9 619 aaKnown RBP16■□□□□ 0.15
RAB40B-202ENST00000538809 TRAF3IP3Q9Y228 551 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 CCL26Q9Y258 94 aa16■□□□□ 0.15
RAB40B-202ENST00000538809 MAN2B1O00754 1011 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 NCAM2O15394 837 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 BDNFP23560 247 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 MAGEA9P43362 315 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 RAP1GAPP47736 663 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 KPNA1P52294 538 aaPredicted RBP15.99■□□□□ 0.15
RAB40B-202ENST00000538809 DLG4P78352 724 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 TNK2Q07912 1038 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 ARHGAP29Q52LW3 1261 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 CEP135Q66GS9 1140 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 CMTM8Q8IZV2 173 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 ZNF687Q8N1G0 1237 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 PARD3BQ8TEW8 1205 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 MRPS31Q92665 395 aaKnown RBP15.99■□□□□ 0.15
RAB40B-202ENST00000538809 NELL2Q99435 816 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 XYLT2Q9H1B5 865 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 SMYD3Q9H7B4 428 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 TRPC7Q9HCX4 862 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 OBP2AQ9NY56 170 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 GTSE1Q9NYZ3 720 aa15.99■□□□□ 0.15
RAB40B-202ENST00000538809 MAPK8IP1Q9UQF2 711 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms