RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ZNF577Q9BSK1 485 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 ST6GALNAC4Q9H4F1 302 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 CNTN3Q9P232 1028 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 OPHN1O60890 802 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 PIAS1O75925 651 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 USP1O94782 785 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 VAV1P15498 845 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 MED21Q13503 144 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 B3GNT9Q6UX72 402 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 RAPH1Q70E73 1250 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 RASSF3Q86WH2 238 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 RBM12BQ8IXT5 1001 aaKnown RBP19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 ASPHQ12797 758 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 CEP55Q53EZ4 464 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 MFSD7Q6UXD7 560 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 C11orf70Q9BRQ4 267 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 EPB41L1Q9H4G0 881 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 NDUFA13Q9P0J0 144 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 SNCAIPQ9Y6H5 919 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 SCINQ9Y6U3 715 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 IQANK1A0A1B0GTG1 560 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 IFNB1P01574 187 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 SPATA31D3P0C874 917 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 HARSP12081 509 aaKnown RBP19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 GTF2H1P32780 548 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 SLC18A2Q05940 514 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 SH2D4BQ5SQS7 431 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 SPATA31D4Q6ZUB0 917 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 PPIL6Q8IXY8 311 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 ELMO3Q96BJ8 720 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 GMCL1Q96IK5 515 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 TEKT3Q9BXF9 490 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 C1orf21Q9H246 121 aa19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 TOPORSQ9NS56 1045 aaPredicted RBP19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 PPARGC1AQ9UBK2 798 aaKnown RBP19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 G3BP2Q9UN86 482 aaKnown RBP19.47■□□□□ 0.71
SFSWAP-207ENST00000538548 SGK1O00141 431 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 TLR3O15455 904 aaKnown RBP19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 ATP9BO43861 1147 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 ASLP04424 464 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 ERFP50548 548 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 BPIFB4P59827 614 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 GTF2IP78347 998 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 KDSRQ06136 332 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 TBCCQ15814 346 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 SHROOM1Q2M3G4 852 aaPredicted RBP19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 MSS51Q4VC12 460 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 ATP13A4Q4VNC1 1196 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 ZFYVE27Q5T4F4 411 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 PLEKHA7Q6IQ23 1121 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 DHDDSQ86SQ9 333 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 RHPN2Q8IUC4 686 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 SIAH1Q8IUQ4 282 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 TMC2Q8TDI7 906 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 FAM172AQ8WUF8 416 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 VCPIP1Q96JH7 1222 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 TMEM121Q9BTD3 319 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 GMEB1Q9Y692 573 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 A6NJR5 290 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 E5RJQ4 531 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 E7ESA3 106 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 KRT1P04264 644 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 FNBP1LQ5T0N5 605 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 SV2AQ7L0J3 742 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 PALM2Q8IXS6 379 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 FBXO36Q8NEA4 188 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 GMCL1P1Q8NEA9 526 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 WDR83Q9BRX9 315 aaKnown RBP19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 C17orf75Q9HAS0 396 aa19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 DNAAF2Q9NVR5 837 aaKnown RBP19.46■□□□□ 0.71
SFSWAP-207ENST00000538548 ZC3H11AO75152 810 aaKnown RBP eCLIP19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 UQCRBP14927 111 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 DSG3P32926 999 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 CCNFP41002 786 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 GRIA2P42262 883 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 XIAPP98170 497 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 R3HDM1Q15032 1099 aaKnown RBP19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 USP37Q86T82 979 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 RPGRQ92834 1020 aaKnown RBP19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 SERAC1Q96JX3 654 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 C7orf26Q96N11 449 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 WWP1Q9H0M0 922 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 S100A14Q9HCY8 104 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 ETNK2Q9NVF9 386 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 ZHX2Q9Y6X8 837 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 I3L4J1 428 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 ZSCAN9O15535 394 aaPredicted RBP19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 NDUFB10O96000 172 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 TSHRP16473 764 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 STIP1P31948 543 aaKnown RBP19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 PLCB3Q01970 1234 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 GAD2Q05329 585 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 SPOCD1Q6ZMY3 1216 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 SH2D5Q6ZV89 423 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 NCAPG2Q86XI2 1143 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 SPIRE2Q8WWL2 714 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 LENG1Q96BZ8 264 aaPredicted RBP19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 C1orf112Q9NSG2 853 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 IP6K2Q9UHH9 426 aa19.45■□□□□ 0.7
SFSWAP-207ENST00000538548 CFBP00751 764 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms