RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ZNF236Q9UL36 1845 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 PRUNE2Q8WUY3 3088 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 C3orf70A6NLC5 250 aaPredicted RBP9.75□□□□□ -0.85
DDB1-211ENST00000538280 SIGLEC16A6NMB1 481 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 DNALI1O14645 258 aaPredicted RBP9.75□□□□□ -0.85
DDB1-211ENST00000538280 B4GALT5O43286 388 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 MED7O43513 233 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 FSBPO95073 299 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 HMGCRP04035 888 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 KRT1P04264 644 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 TXNP10599 105 aaKnown RBP9.75□□□□□ -0.85
DDB1-211ENST00000538280 TCF4P15884 667 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 ATICP31939 592 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 SSTR3P32745 418 aaPredicted RBP9.75□□□□□ -0.85
DDB1-211ENST00000538280 CDKN2BP42772 138 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 CLCN3P51790 818 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 RAD23BP54727 409 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 SLC25A11Q02978 314 aaKnown RBP9.75□□□□□ -0.85
DDB1-211ENST00000538280 TNFAIP2Q03169 654 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 TTLL4Q14679 1199 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 CNGA2Q16280 664 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 ZNF792Q3KQV3 632 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 PTPN20Q4JDL3 420 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 ODF2Q5BJF6 829 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 TMEM63BQ5T3F8 832 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 IZUMO3Q5VZ72 239 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 EFCAB12Q6NXP0 572 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 TAPT1Q6NXT6 567 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 EXOC3L1Q86VI1 746 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 ZCCHC9Q8N567 271 aaKnown RBP9.75□□□□□ -0.85
DDB1-211ENST00000538280 ALLCQ8N6M5 410 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 C1orf127Q8N9H9 656 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 IPO4Q8TEX9 1081 aaKnown RBP9.75□□□□□ -0.85
DDB1-211ENST00000538280 TRAPPC12Q8WVT3 735 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 EMID1Q96A84 441 aaPredicted RBP9.75□□□□□ -0.85
DDB1-211ENST00000538280 CCDC114Q96M63 670 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 SCLT1Q96NL6 688 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 MCEEQ96PE7 176 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 DDX23Q9BUQ8 820 aaKnown RBP9.75□□□□□ -0.85
DDB1-211ENST00000538280 HEMGNQ9BXL5 484 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 FRMD8P1Q9BZ68 369 aaPredicted RBP9.75□□□□□ -0.85
DDB1-211ENST00000538280 PHACTR1Q9C0D0 580 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 KATNBL1Q9H079 304 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 ASB7Q9H672 318 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 MINDY3Q9H8M7 445 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 RPF1Q9H9Y2 349 aaKnown RBP9.75□□□□□ -0.85
DDB1-211ENST00000538280 CYP3A43Q9HB55 503 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 IFT122Q9HBG6 1241 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 ERAP1Q9NZ08 941 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 WDR35Q9P2L0 1181 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 DDX20Q9UHI6 824 aaKnown RBP9.75□□□□□ -0.85
DDB1-211ENST00000538280 CYTH4Q9UIA0 394 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 POLIQ9UNA4 740 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 USTQ9Y2C2 406 aa9.75□□□□□ -0.85
DDB1-211ENST00000538280 ANKRD65E5RJM6 399 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 F8VP50 259 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 INO80B-WBP1J3KQ70 363 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 NDC80O14777 642 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 MAGEB2O15479 319 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 TJP3O95049 919 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 LGALS2P05162 132 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 NFICP08651 508 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 WEE2P0C1S8 567 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 IQCF3P0C7M6 154 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 CXCL8P10145 99 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 HOXD8P13378 290 aaPredicted RBP9.74□□□□□ -0.85
DDB1-211ENST00000538280 ATP5DP30049 168 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 POLR2BP30876 1174 aaKnown RBP9.74□□□□□ -0.85
DDB1-211ENST00000538280 BMP8BP34820 402 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 ADCY8P40145 1251 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 PHKA2P46019 1235 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 GABRB2P47870 512 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 VCPP55072 806 aaKnown RBP9.74□□□□□ -0.85
DDB1-211ENST00000538280 TFAMQ00059 246 aaKnown RBP9.74□□□□□ -0.85
DDB1-211ENST00000538280 LAMC2Q13753 1193 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 ZNF268Q14587 947 aaPredicted RBP9.74□□□□□ -0.85
DDB1-211ENST00000538280 LLGL1Q15334 1064 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 CCL14Q16627 93 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 KYAT1Q16773 422 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 ATP13A4Q4VNC1 1196 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 LACTB2Q53H82 288 aaPredicted RBP9.74□□□□□ -0.85
DDB1-211ENST00000538280 TFDP3Q5H9I0 405 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 ZNF667Q5HYK9 610 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 TXNRD3NBQ6F5E7 133 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 VSTM1Q6UX27 236 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 ZNF365Q70YC5 407 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 ARMCX2Q7L311 632 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 TAOK1Q7L7X3 1001 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 ZNF467Q7Z7K2 595 aaPredicted RBP9.74□□□□□ -0.85
DDB1-211ENST00000538280 ERICH1Q86X53 443 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 TMEM192Q8IY95 271 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 THNSL1Q8IYQ7 743 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 RIBC1Q8N443 379 aaPredicted RBP9.74□□□□□ -0.85
DDB1-211ENST00000538280 ARFGAP1Q8N6T3 406 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 SLC4A11Q8NBS3 891 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 SLC35B2Q8TB61 432 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 MDM1Q8TC05 714 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 P3H4Q92791 437 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 MCRS1Q96EZ8 462 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 CHMP6Q96FZ7 201 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms