RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 AHRRA9YTQ3 701 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 TOR1BO14657 336 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 CYP27B1O15528 508 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 RRP9O43818 475 aaKnown RBP6.89□□□□□ -1.31
SNHG1-205ENST00000537869 RPS6KA4O75676 772 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 ZFPL1O95159 310 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 SERPINF1P36955 418 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 BIRC3Q13489 604 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 CNGB1Q14028 1251 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-205ENST00000537869 PTK2BQ14289 1009 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 RRP1BQ14684 758 aaKnown RBP6.89□□□□□ -1.31
SNHG1-205ENST00000537869 ICAM4Q14773 271 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 RAP1GAP2Q684P5 730 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 TMEM108Q6UXF1 575 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 BPIFB1Q8TDL5 484 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 ZNF384Q8TF68 577 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 STYXQ8WUJ0 223 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 PPP2R3CQ969Q6 453 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 SORBS1Q9BX66 1292 aaKnown RBP6.89□□□□□ -1.31
SNHG1-205ENST00000537869 PCDHAC1Q9H158 963 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 SORCS3Q9UPU3 1222 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 GPR52Q9Y2T5 361 aa6.89□□□□□ -1.31
SNHG1-205ENST00000537869 MTO1Q9Y2Z2 717 aaKnown RBP6.89□□□□□ -1.31
SNHG1-205ENST00000537869 DIRC3C9JPN6 131 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 ACKR2O00590 384 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 TRIM38O00635 465 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 ERN1O75460 977 aaKnown RBP6.88□□□□□ -1.31
SNHG1-205ENST00000537869 SCAF4O95104 1147 aaKnown RBP6.88□□□□□ -1.31
SNHG1-205ENST00000537869 VEGFAP15692 232 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-205ENST00000537869 LRPAP1P30533 357 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 ATICP31939 592 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 DGKEP52429 567 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 LOXL3P58215 753 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 MYO1EQ12965 1108 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 ZNF750Q32MQ0 723 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 PTCHD3Q3KNS1 767 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 TMTC4Q5T4D3 741 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 CACHD1Q5VU97 1274 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 LRRC55Q6ZSA7 311 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 GDF7Q7Z4P5 450 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.88□□□□□ -1.312e-11■■■■■ 59.4
SNHG1-205ENST00000537869 FAM71BQ8TC56 605 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 LTV1Q96GA3 475 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-205ENST00000537869 NELL2Q99435 816 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 ISCA1Q9BUE6 129 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 SLC46A2Q9BY10 475 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 SCAF8Q9UPN6 1271 aaKnown RBP6.88□□□□□ -1.31
SNHG1-205ENST00000537869 CDY1Q9Y6F8 540 aa6.88□□□□□ -1.31
SNHG1-205ENST00000537869 E7ENX8 843 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 SYT5O00445 386 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 RASAL1O95294 804 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 TNFRSF6BO95407 300 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 ITGB3P05106 788 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 IDEP14735 1019 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 EGR1P18146 543 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 ITGALP20701 1170 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 KCNA3P22001 575 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 ANXA11P50995 505 aaKnown RBP6.87□□□□□ -1.31
SNHG1-205ENST00000537869 TAP2Q03519 686 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 CRHR2Q13324 411 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 DYRK1AQ13627 763 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 POSTNQ15063 836 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 MAPKAPK3Q16644 382 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 CD300EQ496F6 205 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-205ENST00000537869 B3GNTL1Q67FW5 361 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-205ENST00000537869 CLNKQ7Z7G1 428 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 CCDC28AQ8IWP9 274 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 TMEM132CQ8N3T6 1108 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 SMCR8Q8TEV9 937 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-205ENST00000537869 TEPSINQ96N21 525 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 ADOQ96SZ5 270 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 PAGR1Q9BTK6 254 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 PTDSS2Q9BVG9 487 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 TMEM120AQ9BXJ8 343 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 CXorf36Q9H7Y0 433 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 CD248Q9HCU0 757 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 RNF181Q9P0P0 153 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 JAG2Q9Y219 1238 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 NEU2Q9Y3R4 380 aa6.87□□□□□ -1.31
SNHG1-205ENST00000537869 PRAMEF33A0A0G2JMD5 474 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 RGS10O43665 173 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 PRAMEF10O60809 474 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 PPFIA4O75335 1185 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 SOAT2O75908 522 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 PIAS2O75928 621 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 CCT5P48643 541 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 FAM189BP81408 668 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 SATB1Q01826 763 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.86□□□□□ -1.31
SNHG1-205ENST00000537869 JMJD6Q6NYC1 403 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-205ENST00000537869 USP17L6PQ6QN14 398 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 CPT1CQ8TCG5 803 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 TRAPPC12Q8WVT3 735 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 EDAQ92838 391 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 TRIM63Q969Q1 353 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 NACC2Q96BF6 587 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 ZNF768Q9H5H4 540 aaKnown RBP6.86□□□□□ -1.31
SNHG1-205ENST00000537869 TMEM8AQ9HCN3 771 aa6.86□□□□□ -1.31
SNHG1-205ENST00000537869 ITM2CQ9NQX7 267 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms