RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 MXD3Q9BW11 206 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 NOS1APO75052 506 aaPredicted RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 LIFRP42702 1097 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 LRRC24Q50LG9 513 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 YTHDF3Q7Z739 585 aaKnown RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 PSMA8Q8TAA3 256 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 NMRK1Q9NWW6 199 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 CENPXA8MT69 81 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 SSNA1O43805 119 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ATP6V1B2P21281 511 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 RFX1P22670 979 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ARL13BQ3SXY8 428 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 EFCAB1Q9HAE3 211 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 RAB6BQ9NRW1 208 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TFRCP02786 760 aaKnown RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 GLI1P08151 1106 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 COILP38432 576 aaPredicted RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 PHKA1P46020 1223 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 KCNQ4P56696 695 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 IFI35P80217 286 aaPredicted RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 GTF2H3Q13889 308 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ASPRV1Q53RT3 343 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ELMO2Q96JJ3 720 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 MSTO1Q9BUK6 570 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 WDR37Q9Y2I8 494 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TESPA1A2RU30 521 aaPredicted RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 A8MUI8 341 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 GNPATO15228 680 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ITIH2P19823 946 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 COMTP21964 271 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 CCNCP24863 283 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF57Q68EA5 555 aaPredicted RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 POTEGQ6S5H5 508 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 KCTD17Q8N5Z5 321 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TMEM35BQ8NCS4 154 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 SLC30A5Q8TAD4 765 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 COX4I2Q96KJ9 171 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TEX13BQ9BXU2 312 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 SLC12A4Q9UP95 1085 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 FANCMQ8IYD8 2048 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ENTPD5O75356 428 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 S100A6P06703 90 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ALAS1P13196 640 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF846Q147U1 533 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TAF5Q15542 800 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TTMPQ5BVD1 217 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 CRELD2Q6UXH1 353 aaPredicted RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 IKBIPQ70UQ0 350 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 NECAB2Q7Z6G3 386 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 FRMD5Q7Z6J6 570 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 BBS7Q8IWZ6 715 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 C12orf4Q9NQ89 552 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 PTPRTO14522 1441 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TRPC5OSA6NMA1 111 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 SNTNA6NMZ2 147 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 RDM1Q8NG50 284 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TSPAN17Q96FV3 270 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ZC3H12CQ9C0D7 883 aaKnown RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TMEM206Q9H813 350 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TRMT13Q9NUP7 481 aaKnown RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 SLC39A10Q9ULF5 831 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ADGRL2O95490 1459 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 A0A1W2PRG6 482 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 RPL5P46777 297 aaKnown RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 CTSWP56202 376 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF284Q2VY69 593 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 MZT2BQ6NZ67 158 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 PROX1Q92786 737 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TEKT3Q9BXF9 490 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 NPHP3-ACAD11A0A0J9YXS1 232 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 PP2D1A8MPX8 630 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 GALCP54803 685 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 SPIDRQ14159 915 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 PTK2BQ14289 1009 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 MXD4Q14582 209 aaPredicted RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 NLRP10Q86W26 655 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 JADE3Q92613 823 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 RAD54LQ92698 747 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 KIFC1Q9BW19 673 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 RABL2AQ9UBK7 228 aaPredicted RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 STOML2Q9UJZ1 356 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF222Q9UK12 451 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 PDS5AQ29RF7 1337 aaKnown RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 EMSYQ7Z589 1322 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TCOF1Q13428 1488 aaKnown RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ARPC4-TTLL3A0A0A6YYG9 625 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 POTEMA6NI47 508 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 KIF28PB7ZC32 967 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 NR1H2P55055 460 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 USP46P62068 366 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 COBLL1Q53SF7 1204 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TSEN2Q8NCE0 465 aaKnown RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 SCFD1Q8WVM8 642 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 CDHR1Q96JP9 859 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 AGPAT1Q99943 283 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 DGCR6LQ9BY27 220 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 MAGEB5Q9BZ81 275 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ILKAPQ9H0C8 392 aaPredicted RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 VTA1Q9NP79 307 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms