RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TJP2Q9UDY2 1190 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 PPP2R2CQ9Y2T4 447 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 PCDHA13Q9Y5I0 950 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 MED7O43513 233 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 TBC1D4O60343 1298 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 BEST1O76090 585 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 DNAJB1P25685 340 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 ANXA13P27216 316 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 PPM1AP35813 382 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 SLC39A12Q504Y0 691 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 PKDCCQ504Y2 493 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 LLGL2Q6P1M3 1020 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 FAM171BQ6P995 826 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 PHLDB2Q86SQ0 1253 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 MYCBPAPQ8TBZ2 947 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 SECISBP2LQ93073 1101 aaKnown RBP16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 PGLYRP2Q96PD5 576 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 LACRTQ9GZZ8 138 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 ZCWPW1Q9H0M4 648 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 CERS4Q9HA82 394 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 CHORDC1Q9UHD1 332 aaPredicted RBP16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 KIAA1257Q9ULG3 409 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 PCDHA11Q9Y5I1 949 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 FTLP02792 175 aaPredicted RBP16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 MAGEA1P43355 309 aa16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 GLUD2P49448 558 aa16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 TAP1Q03518 808 aa16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 SPA17Q15506 151 aa16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 ZNF280DQ6N043 979 aa16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 KIAA1841Q6NSI8 718 aa16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 FAM35AQ86V20 835 aa16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 PIK3R5Q8WYR1 880 aa16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 HNRNPABQ99729 332 aaKnown RBP16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 MED10Q9BTT4 135 aa16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 NKX2-4Q9H2Z4 354 aa16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 PCDHGC5Q9Y5F6 944 aa16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 PLXNA4Q9HCM2 1894 aa16.59■□□□□ 0.25
SFSWAP-206ENST00000537582 PIK3R2O00459 728 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 ATMINO43313 823 aaPredicted RBP16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 GABBR2O75899 941 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 VNN2O95498 520 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 CCDC175P0C221 793 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 ABCB4P21439 1286 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 GPD2P43304 727 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 GALCP54803 685 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 TSPY1Q01534 308 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 PLCB3Q01970 1234 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 DSG1Q02413 1049 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 PDE4CQ08493 712 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 PSMD5Q16401 504 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 SMYD5Q6GMV2 418 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 ACAD10Q6JQN1 1059 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 CHRDL2Q6WN34 429 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 ANKS3Q6ZW76 656 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 REXO1L1PQ8IX06 675 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 CCAR2Q8N163 923 aaKnown RBP16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 TTC9BQ8N6N2 239 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 KRT82Q9NSB4 513 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 MTRRQ9UBK8 725 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 CDY1Q9Y6F8 540 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 DUSP10Q9Y6W6 482 aa16.58■□□□□ 0.24
SFSWAP-206ENST00000537582 BDNFP23560 247 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 CDH5P33151 784 aaPredicted RBP16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 BMP8BP34820 402 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 ARHGAP25P42331 645 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 RGS7P49802 495 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 ERVFC1P60507 584 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 CENPCQ03188 943 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 KRT17Q04695 432 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 PTPN20Q4JDL3 420 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 TRIM72Q6ZMU5 477 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 RNF19BQ6ZMZ0 732 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 MMS22LQ6ZRQ5 1243 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 ZSCAN30Q86W11 494 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 TDHQ8IZJ6 230 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 TMEM35BQ8NCS4 154 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 ARHGEF26Q96DR7 871 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 PPP1R13BQ96KQ4 1090 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 CPXM1Q96SM3 734 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 CLSTN3Q9BQT9 956 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 C11orf70Q9BRQ4 267 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 THAP2Q9H0W7 228 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 ZBP1Q9H171 429 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 ISCUQ9H1K1 167 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 LHX5Q9H2C1 402 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 NLRC5Q86WI3 1866 aa16.57■□□□□ 0.24
SFSWAP-206ENST00000537582 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 OR6C75A6NL08 312 aa16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 H7C4K7 107 aa16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 GRM6O15303 877 aa16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 RTN2O75298 545 aa16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 IPO7O95373 1038 aaKnown RBP16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 LSM8O95777 96 aaKnown RBP16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 URODP06132 367 aa16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 CPB1P15086 417 aa16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 OR1D2P34982 312 aa16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 VAV2P52735 878 aa16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 KRT83P78385 493 aa16.56■□□□□ 0.24
SFSWAP-206ENST00000537582 PTP4A2Q12974 167 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms