RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 STX3Q13277 289 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 GRM2Q14416 872 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 ACAP1Q15027 740 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 CHI3L2Q15782 390 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 HIF1AQ16665 826 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 CLPPQ16740 277 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 CLNKQ7Z7G1 428 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 DGKHQ86XP1 1220 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 DEPTORQ8TB45 409 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 TNFRSF25Q93038 417 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 FAM111AQ96PZ2 611 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 C20orf96Q9NUD7 363 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 C6orf203Q9P0P8 240 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 ZHX2Q9Y6X8 837 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 MYH6P13533 1939 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 ALOX5P09917 674 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 PSMA2P25787 234 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 SOX11P35716 441 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 YWHAEP62258 255 aaKnown RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 OTUD4Q01804 1114 aaKnown RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 FOXD4Q12950 439 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 FLOT2Q14254 428 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 LINC00299Q6ZSB3 139 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 DHDDSQ86SQ9 333 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 CCNYQ8ND76 341 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 ATG4AQ8WYN0 398 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 DLG3Q92796 817 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 BORCS6Q96GS4 357 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 ADAM7Q9H2U9 754 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 LRRC19Q9H756 370 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 PARVGQ9HBI0 331 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 KCNK4Q9NYG8 393 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 TAGLN3Q9UI15 199 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 VCPP55072 806 aaKnown RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 TTLL12Q14166 644 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 EFHC1Q5JVL4 640 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 TTC33Q6PID6 262 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 TRIM67Q6ZTA4 783 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 SIX6OS1Q8N1H7 587 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 OR6Y1Q8NGX8 325 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 KPNA7A9QM74 516 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 NBPF26B4DH59 902 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 E9PBE3 544 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 CYP26A1O43174 497 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF24P17028 368 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 CIITAP33076 1130 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 COPAP53621 1224 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 SCARA5Q6ZMJ2 495 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 LPCAT2Q7L5N7 544 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 ERI1Q8IV48 349 aaKnown RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 BBS5Q8N3I7 341 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 KIAA1683Q9H0B3 1180 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 THAP2Q9H0W7 228 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 CYLDQ9NQC7 956 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 KLHL2O95198 593 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 GZMAP12544 262 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 AKR1B1P15121 316 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 RAG1P15918 1043 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 TAC1P20366 129 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 SLC1A1P43005 524 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 SNAP25P60880 206 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 IFRD2Q12894 506 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 MOGSQ13724 837 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 LPIN1Q14693 890 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 TRADDQ15628 312 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 TRAF7Q6Q0C0 670 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 LRRC55Q6ZSA7 311 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 DNAAF3Q8N9W5 541 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 FLCNQ8NFG4 579 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 HNRNPABQ99729 332 aaKnown RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 SENP7Q9BQF6 1050 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 ZSWIM1Q9BR11 485 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 PKD2L2Q9NZM6 624 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 GPC6Q9Y625 555 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 ALG6Q9Y672 507 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 MYMKA6NI61 221 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 GSC2O15499 205 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 TRMUO75648 421 aaKnown RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 PGM3O95394 542 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 RASA1P20936 1047 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 TCP10Q12799 353 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 DMP1Q13316 513 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 EFTUD2Q15029 972 aaKnown RBP eCLIP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 POTEGQ6S5H5 508 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 PDPRQ8NCN5 879 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 GABPB2Q8TAK5 448 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 ARHGEF1Q92888 912 aaKnown RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 KLC2Q9H0B6 622 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 TMEM206Q9H813 350 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 DIABLOQ9NR28 239 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 CARD8Q9Y2G2 431 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 MYH13Q9UKX3 1938 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 PDXKO00764 312 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 KLF11O14901 512 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 TLR3O15455 904 aaKnown RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 FAM58BPP0C7Q3 252 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 BGNP21810 368 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 CDO1Q16878 200 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 PPP1R18Q6NYC8 613 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 C16orf89Q6UX73 402 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms