RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ABCB6Q9NP58 842 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 TMEM30AQ9NV96 361 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 CA14Q9ULX7 337 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 CTNND2Q9UQB3 1225 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 CLDN5O00501 218 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 PSMA7O14818 248 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 SLC16A3O15427 465 aaKnown RBP14.05□□□□□ -0.16
PRKDC-206ENST00000536429 FAM163BP0C2L3 166 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 NPR3P17342 541 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 PTPN1P18031 435 aaKnown RBP14.05□□□□□ -0.16
PRKDC-206ENST00000536429 STX17P56962 302 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 CYP27A1Q02318 531 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 LRRC63Q05C16 580 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 ENPEPQ07075 957 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 GRM2Q14416 872 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 VEPH1Q14D04 833 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 SGSM1Q2NKQ1 1148 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 CFAP221Q4G0U5 840 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 CBWD6Q4V339 395 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 CBWD3Q5JTY5 395 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 CBWD5Q5RIA9 395 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 TTI2Q6NXR4 508 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 CLEC17AQ6ZS10 378 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 SIX5Q8N196 739 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 FBXL6Q8N531 539 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 ZSCAN18Q8TBC5 510 aaPredicted RBP14.05□□□□□ -0.16
PRKDC-206ENST00000536429 NELFBQ8WX92 580 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 DHTKD1Q96HY7 919 aaPredicted RBP14.05□□□□□ -0.16
PRKDC-206ENST00000536429 ZNF518BQ9C0D4 1074 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 SLITRK6Q9H5Y7 841 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 TMEM8AQ9HCN3 771 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 MAGEC2Q9UBF1 373 aaPredicted RBP14.05□□□□□ -0.16
PRKDC-206ENST00000536429 FBXL21Q9UKT6 434 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 MAGED2Q9UNF1 606 aaPredicted RBP14.05□□□□□ -0.16
PRKDC-206ENST00000536429 MUC6Q6W4X9 2439 aa14.05□□□□□ -0.16
PRKDC-206ENST00000536429 SLC38A8A6NNN8 435 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 ECI2O75521 394 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 TADA3O75528 432 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 F11P03951 625 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 MXI1P50539 228 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 NOP14P78316 857 aaKnown RBP14.04□□□□□ -0.16
PRKDC-206ENST00000536429 STIM1Q13586 685 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 DCAF17Q5H9S7 520 aaPredicted RBP14.04□□□□□ -0.16
PRKDC-206ENST00000536429 GPR158Q5T848 1215 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 CWF19L1Q69YN2 538 aaKnown RBP14.04□□□□□ -0.16
PRKDC-206ENST00000536429 C4orf50Q6ZRC1 276 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 B3GALNT2Q8NCR0 500 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 SMARCD2Q92925 531 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 ELSPBP1Q96BH3 223 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 FUBP3Q96I24 572 aaKnown RBP eCLIP14.04□□□□□ -0.16
PRKDC-206ENST00000536429 LRRC3BQ96PB8 259 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 TWNKQ96RR1 684 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 B3GNT5Q9BYG0 378 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 GTPBP4Q9BZE4 634 aaKnown RBP14.04□□□□□ -0.16
PRKDC-206ENST00000536429 SMG9Q9H0W8 520 aaKnown RBP14.04□□□□□ -0.16
PRKDC-206ENST00000536429 SLC2A4RGQ9NR83 387 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 LMBRD1Q9NUN5 540 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 KIAA1468Q9P260 1216 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 ZNF318Q5VUA4 2279 aa14.04□□□□□ -0.16
PRKDC-206ENST00000536429 DMDP11532 3685 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 NOL4O94818 638 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 PRAMEF12O95522 483 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 GTF2H1P32780 548 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 MAGEA11P43364 429 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 NDST1P52848 882 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 NLRP12P59046 1061 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 USP46P62068 366 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 RPL10AP62906 217 aaKnown RBP14.03□□□□□ -0.16
PRKDC-206ENST00000536429 TAF12Q16514 161 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 TCERG1LQ5VWI1 586 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 KRT39Q6A163 491 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 VITQ6UXI7 678 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 PAQR9Q6ZVX9 377 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 ACOT1Q86TX2 421 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 FLCNQ8NFG4 579 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 TAF4BQ92750 862 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 MED15Q96RN5 788 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 BCO2Q9BYV7 579 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 CLSTN2Q9H4D0 955 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 TRPV4Q9HBA0 871 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 ZFP14Q9HCL3 533 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 WNT16Q9UBV4 365 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 COL4A3Q01955 1670 aa14.03□□□□□ -0.16
PRKDC-206ENST00000536429 HEPACAM2A8MVW5 462 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 F8VP50 259 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 PI15O43692 258 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 CSH1P0DML2 217 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 CSH2P0DML3 217 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 P4HA1P13674 534 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 CDC25CP30307 473 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 AVPR2P30518 371 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 GRIK1P39086 918 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 MAPRE1Q15691 268 aaKnown RBP14.02□□□□□ -0.17
PRKDC-206ENST00000536429 VSTM1Q6UX27 236 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 FILIP1Q7Z7B0 1213 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 ARID3BQ8IVW6 561 aaPredicted RBP14.02□□□□□ -0.17
PRKDC-206ENST00000536429 SUGP1Q8IWZ8 645 aaKnown RBP14.02□□□□□ -0.17
PRKDC-206ENST00000536429 TMEM105Q8N8V8 129 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 SLC35C1Q96A29 364 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 IPO9Q96P70 1041 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms