RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 SYKP43405 635 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 RPS9P46781 194 aaKnown RBP15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 NDUFA8P51970 172 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 TNNC1P63316 161 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 CYP27A1Q02318 531 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 MTAPQ13126 283 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 WDR72Q3MJ13 1102 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 CFAP221Q4G0U5 840 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 ARHGAP29Q52LW3 1261 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 ZC3H14Q6PJT7 736 aaKnown RBP15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 TSSK4Q6SA08 328 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 C4orf50Q6ZRC1 276 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 LIMS2Q7Z4I7 341 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 C12orf56Q8IXR9 622 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 CMTM8Q8IZV2 173 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 ADSSL1Q8N142 457 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 CELF5Q8N6W0 485 aaKnown RBP15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 OR6B3Q8NGW1 331 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 GOLGA5Q8TBA6 731 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 MRPS31Q92665 395 aaKnown RBP15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 MYLPFQ96A32 169 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 GZF1Q9H116 711 aaPredicted RBP15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 SNX25Q9H3E2 840 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 LMAN1LQ9HAT1 526 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 CRTAC1Q9NQ79 661 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 OBP2AQ9NY56 170 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 GTSE1Q9NYZ3 720 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 MAGEC2Q9UBF1 373 aaPredicted RBP15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 USP25Q9UHP3 1055 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 NOL4O94818 638 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 PRR29P0C7W0 189 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 BDNFP23560 247 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 WEE1P30291 646 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 GNL1P36915 607 aaPredicted RBP15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 MYL6P60660 151 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 TNK2Q07912 1038 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 PSMD2Q13200 908 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 BIRC3Q13489 604 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 MDH1BQ5I0G3 518 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 FAM171BQ6P995 826 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 ZNF687Q8N1G0 1237 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 TTC16Q8NEE8 873 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 PLEKHO2Q8TD55 490 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 FUBP3Q96I24 572 aaKnown RBP eCLIP15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 TRPC7Q9HCX4 862 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 THG1LQ9NWX6 298 aaKnown RBP15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 UXTQ9UBK9 157 aaPredicted RBP15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 NXF1Q9UBU9 619 aaKnown RBP15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 FBXO4Q9UKT5 387 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 CCL26Q9Y258 94 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 ATP6V1DQ9Y5K8 247 aa15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 NUP210Q8TEM1 1887 aaPredicted RBP15.28■□□□□ 0.04
RTN3P1-201ENST00000536295 VPS13AQ96RL7 3174 aa15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 LRRIQ3A6PVS8 624 aaPredicted RBP15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 SPECC1L-ADORA2AF8WAN1 911 aa15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 TADA3O75528 432 aa15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 LMNAP02545 664 aaKnown RBP15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 RPN1P04843 607 aaKnown RBP15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 DDX6P26196 483 aaKnown RBP eCLIP15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 GRIK1P39086 918 aa15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 MAPRE1Q15691 268 aaKnown RBP15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 TXNDC11Q6PKC3 985 aa15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 FSIP1Q8NA03 581 aa15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 USP13Q92995 863 aaPredicted RBP15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 ELMO3Q96BJ8 720 aa15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 SCAND2PQ9GZW5 306 aaPredicted RBP15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 KCTD10Q9H3F6 313 aa15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 DPEP3Q9H4B8 488 aa15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 C8orf33Q9H7E9 229 aaPredicted RBP15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 GDPD2Q9HCC8 539 aa15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 ZMYM5Q9UJ78 669 aa15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 NME7Q9Y5B8 376 aa15.27■□□□□ 0.04
RTN3P1-201ENST00000536295 CACNA1IQ9P0X4 2223 aa15.27■□□□□ 0.03
RTN3P1-201ENST00000536295 PATJQ8NI35 1801 aa15.27■□□□□ 0.03
RTN3P1-201ENST00000536295 NR3C1P04150 777 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 MYL1P05976 194 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 CHRNB1P11230 501 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 CTHP32929 405 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 MAGEA11P43364 429 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 PLCB2Q00722 1185 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 ZNF528Q3MIS6 628 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 TDRD10Q5VZ19 366 aaKnown RBP15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 CEP135Q66GS9 1140 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 MON1AQ86VX9 555 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 PARD3BQ8TEW8 1205 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 CCDC47Q96A33 483 aaKnown RBP15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 SYAP1Q96A49 352 aaPredicted RBP15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 TRMT2BQ96GJ1 504 aaKnown RBP15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 MSANTD3Q96H12 275 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 PCED1BQ96HM7 432 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 CYP2S1Q96SQ9 504 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 CHRDQ9H2X0 955 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 SEMA4AQ9H3S1 761 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 GOLPH3LQ9H4A5 285 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 GKN1Q9NS71 199 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 RBM12Q9NTZ6 932 aaKnown RBP15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 TDP1Q9NUW8 608 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 DMAC2Q9NW81 257 aa15.26■□□□□ 0.03
RTN3P1-201ENST00000536295 A8MXQ7 604 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 PDXKO00764 312 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms