RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SLC4A11Q8NBS3 891 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 PDZD8Q8NEN9 1154 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.91□□□□□ -1.78
MCF2-210ENST00000536274 SLC26A7Q8TE54 656 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 GDPD5Q8WTR4 605 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 OSCP1Q8WVF1 389 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 MAML3Q96JK9 1138 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CRNKL1Q9BZJ0 848 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 OLFML3Q9NRN5 406 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ZNF212Q9UDV6 495 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 TTC7AQ9ULT0 858 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 SIK3Q9Y2K2 1263 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ST14Q9Y5Y6 855 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CEPT1Q9Y6K0 416 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 MICAL3Q7RTP6 2002 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 A0A1B0GUL6 1792 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 B2RBV5 119 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 MATN2O00339 956 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 CCRL2O00421 344 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 KIAA0391O15091 583 aaKnown RBP3.9□□□□□ -1.78
MCF2-210ENST00000536274 KDM1AO60341 852 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 ICMTO60725 284 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 B3GALNT1O75752 331 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 ATG7O95352 703 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 LMNAP02545 664 aaKnown RBP3.9□□□□□ -1.78
MCF2-210ENST00000536274 S100A1P23297 94 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 RPS12P25398 132 aaKnown RBP3.9□□□□□ -1.78
MCF2-210ENST00000536274 RPA3P35244 121 aaPredicted RBP3.9□□□□□ -1.78
MCF2-210ENST00000536274 GRM5P41594 1212 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 PCYT1AP49585 367 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 CHN2P52757 468 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 YARSP54577 528 aaKnown RBP3.9□□□□□ -1.78
MCF2-210ENST00000536274 MYBPC1Q00872 1141 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 IFITM2Q01629 132 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 GNA12Q03113 381 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 ITGADQ13349 1161 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 SCARF1Q14162 830 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 UBE2SQ16763 222 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 PGS1Q32NB8 556 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 TMEM63BQ5T3F8 832 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 CYP4A22Q5TCH4 519 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 C1orf146Q5VVC0 180 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 DUPD1Q68J44 220 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 CCDC174Q6PII3 467 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 C3orf62Q6ZUJ4 267 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 ACAD11Q709F0 780 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 TMC7Q7Z402 723 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 PEX26Q7Z412 305 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 DSG4Q86SJ6 1040 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 HEATR4Q86WZ0 1026 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 LRRC6Q86X45 466 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 HELBQ8NG08 1087 aaPredicted RBP3.9□□□□□ -1.78
MCF2-210ENST00000536274 PSPC1Q8WXF1 523 aaKnown RBP3.9□□□□□ -1.78
MCF2-210ENST00000536274 HSPH1Q92598 858 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 C9orf72Q96LT7 481 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 FAM20AQ96MK3 541 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 HGH1Q9BTY7 390 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 ZNF395Q9H8N7 513 aaPredicted RBP3.9□□□□□ -1.78
MCF2-210ENST00000536274 KIAA1586Q9HCI6 787 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 POLE4Q9NR33 117 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 MCM9Q9NXL9 1143 aa3.9□□□□□ -1.78
MCF2-210ENST00000536274 DIS3Q9Y2L1 958 aaKnown RBP3.9□□□□□ -1.78
MCF2-210ENST00000536274 A0A1W2PPM1 405 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 A0A1W2PRG0 241 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 TRIM75PA6NK02 468 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 ATP5J2-PTCD1G3V325 749 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 ZNF213O14771 459 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 PJA2O43164 708 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 AQP9O43315 295 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 PTCD1O75127 700 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 FYNP06241 537 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 NUDT17P0C025 328 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 GOLGA8HP0CJ92 632 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 THRAP10827 490 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 P4HA1P13674 534 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 UQCRBP14927 111 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 CDH2P19022 906 aaPredicted RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 CRABP2P29373 138 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 STAT3P40763 770 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 ZNF135P52742 658 aaPredicted RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 POU5F1Q01860 360 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 MLLT1Q03111 559 aaPredicted RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 ZBTB16Q05516 673 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 ASPHQ12797 758 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 ZNF423Q2M1K9 1284 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 SLC9C1Q4G0N8 1177 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 TMEM67Q5HYA8 995 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 RALGPS1Q5JS13 557 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 CEP78Q5JTW2 689 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 SLC10A5Q5PT55 438 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 PRPF38BQ5VTL8 546 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 AAGABQ6PD74 315 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 UBE2Q1Q7Z7E8 422 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 ZNF410Q86VK4 478 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 ESX1Q8N693 406 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 APPL2Q8NEU8 664 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 NCOA7Q8NI08 942 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 PLEKHO2Q8TD55 490 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 APPBP2Q92624 585 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 PTCD3Q96EY7 689 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms