RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CISHQ9NSE2 258 aa19.06■□□□□ 0.64
DDX55-204ENST00000536079 P4HA2O15460 535 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 CCDC130P13994 396 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 GJA1P17302 382 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 PTPN2P17706 415 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 SLC9A1P19634 815 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 FSHRP23945 695 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 ALDH1A3P47895 512 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 TUFMP49411 452 aaKnown RBP19.05■□□□□ 0.64
DDX55-204ENST00000536079 CUL2Q13617 745 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 CFAP221Q4G0U5 840 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 PABPC1LQ4VXU2 614 aaKnown RBP19.05■□□□□ 0.64
DDX55-204ENST00000536079 ZNF394Q53GI3 561 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 TCP11X2Q5H9J9 407 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 PHLDB3Q6NSJ2 640 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 DNAJB7Q7Z6W7 309 aaPredicted RBP19.05■□□□□ 0.64
DDX55-204ENST00000536079 CRYBG2Q8N1P7 616 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 ING5Q8WYH8 240 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 ZNF512Q96ME7 567 aaPredicted RBP19.05■□□□□ 0.64
DDX55-204ENST00000536079 TUBGCP2Q9BSJ2 902 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 ABCB6Q9NP58 842 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 TAB2Q9NYJ8 693 aa19.05■□□□□ 0.64
DDX55-204ENST00000536079 MAGEC2Q9UBF1 373 aaPredicted RBP19.05■□□□□ 0.64
DDX55-204ENST00000536079 CEBPBP17676 345 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 ACO1P21399 889 aaKnown RBP19.04■□□□□ 0.64
DDX55-204ENST00000536079 SSTR3P32745 418 aaPredicted RBP19.04■□□□□ 0.64
DDX55-204ENST00000536079 EPHB3P54753 998 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 MAN2A1Q16706 1144 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 ZSCAN23Q3MJ62 389 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 DPY19L2P1Q6NXN4 242 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 GJB7Q6PEY0 223 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 RRAGAQ7L523 313 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 UNC93AQ86WB7 457 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 SCN4BQ8IWT1 228 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 DHX40Q8IX18 779 aaKnown RBP19.04■□□□□ 0.64
DDX55-204ENST00000536079 FUKQ8N0W3 1084 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 AOPEPQ8N6M6 819 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 KREMEN1Q96MU8 473 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 FAM49BQ9NUQ9 324 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 MUC3AQ02505 3323 aa19.04■□□□□ 0.64
DDX55-204ENST00000536079 CALCAP01258 141 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 MYL4P12829 197 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 PRKCSHP14314 528 aaPredicted RBP19.03■□□□□ 0.64
DDX55-204ENST00000536079 HMGA1P17096 107 aaKnown RBP19.03■□□□□ 0.64
DDX55-204ENST00000536079 PTMSP20962 102 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 MAGEA11P43364 429 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 RAD23BP54727 409 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 EPHA5P54756 1037 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 MYL5Q02045 173 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 PLD1Q13393 1074 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 VWA3BQ502W6 1294 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 C4orf50Q6ZRC1 276 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 FAM114A1Q8IWE2 563 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 SLC4A11Q8NBS3 891 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 PSMG2Q969U7 264 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 FUBP3Q96I24 572 aaKnown RBP eCLIP19.03■□□□□ 0.64
DDX55-204ENST00000536079 FAXDC2Q96IV6 333 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 NT5C1BQ96P26 610 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 NDST4Q9H3R1 872 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 IL21Q9HBE4 155 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 AVENQ9NQS1 362 aaPredicted RBP19.03■□□□□ 0.64
DDX55-204ENST00000536079 GCNT4Q9P109 453 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 LIMD1Q9UGP4 676 aa19.03■□□□□ 0.64
DDX55-204ENST00000536079 AJAP1Q9UKB5 411 aaPredicted RBP19.03■□□□□ 0.64
DDX55-204ENST00000536079 SLC38A8A6NNN8 435 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 RNF225M0QZC1 329 aaPredicted RBP19.02■□□□□ 0.64
DDX55-204ENST00000536079 BEST1O76090 585 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 ASGR2P07307 311 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 ZNF18P17022 549 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 GBP2P32456 591 aaPredicted RBP19.02■□□□□ 0.64
DDX55-204ENST00000536079 KCNMA1Q12791 1236 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 KRT31Q15323 416 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 MAPRE1Q15691 268 aaKnown RBP19.02■□□□□ 0.64
DDX55-204ENST00000536079 IQCEQ6IPM2 695 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 GAREM2Q75VX8 874 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 FAM35AQ86V20 835 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 RNF135Q8IUD6 432 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 NPAS3Q8IXF0 933 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 ELMOD1Q8N336 334 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 PPM1KQ8N3J5 372 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 TDRD5Q8NAT2 981 aaKnown RBP19.02■□□□□ 0.64
DDX55-204ENST00000536079 SHKBP1Q8TBC3 707 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 FAM200AQ8TCP9 573 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 SLC2A14Q8TDB8 520 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 FGF13Q92913 245 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 TNIP3Q96KP6 325 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 ZSWIM3Q96MP5 696 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 KCNK16Q96T55 309 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 NT5C1AQ9BXI3 368 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 SIX2Q9NPC8 291 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 USTQ9Y2C2 406 aa19.02■□□□□ 0.64
DDX55-204ENST00000536079 MRPS23Q9Y3D9 190 aaKnown RBP19.02■□□□□ 0.64
DDX55-204ENST00000536079 TTC28Q96AY4 2481 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 F8VP50 259 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 EEF1GP26641 437 aaKnown RBP19.01■□□□□ 0.63
DDX55-204ENST00000536079 PON1P27169 355 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 ADORA2BP29275 332 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 GRIK1P39086 918 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 USP46P62068 366 aa19.01■□□□□ 0.63
DDX55-204ENST00000536079 STXBP5Q5T5C0 1151 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms