RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 BDH2Q9BUT1 245 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 B3GNT5Q9BYG0 378 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 UNKQ9C0B0 810 aaKnown RBP3.97□□□□□ -1.77
SNHG1-202ENST00000535689 LDAHQ9H6V9 325 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 RSAD1Q9HA92 442 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-202ENST00000535689 SMPD4Q9NXE4 827 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 NOX1Q9Y5S8 564 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 DUSP10Q9Y6W6 482 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 ATRNL1Q5VV63 1379 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 ANKRD36BQ8N2N9 1353 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 TAF1LQ8IZX4 1826 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 TUBGCP6Q96RT7 1819 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 DRGXA6NNA5 263 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 F2RL2O00254 374 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 RNASET2O00584 256 aaKnown RBP3.96□□□□□ -1.78
SNHG1-202ENST00000535689 GPR42O15529 346 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 PQBP1O60828 265 aaKnown RBP3.96□□□□□ -1.78
SNHG1-202ENST00000535689 ERN1O75460 977 aaKnown RBP3.96□□□□□ -1.78
SNHG1-202ENST00000535689 IDEP14735 1019 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 HOXA5P20719 270 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 ACRV1P26436 265 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 PEX2P28328 305 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 SLC7A1P30825 629 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 PTGS2P35354 604 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 ZNF280AP59817 542 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-202ENST00000535689 BLOC1S1P78537 153 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 BIRC2Q13490 618 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 GRM3Q14832 879 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 UTP14CQ5TAP6 766 aaKnown RBP3.96□□□□□ -1.78
SNHG1-202ENST00000535689 LAYNQ6UX15 382 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 HTR3DQ70Z44 454 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 MED25Q71SY5 747 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 OVCH2Q7RTZ1 564 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 LIMS2Q7Z4I7 341 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 FAM90A1Q86YD7 464 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 RHOT2Q8IXI1 618 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 ELOA2Q8IYF1 753 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-202ENST00000535689 FAM156AQ8NDB6 213 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 TBC1D15Q8TC07 691 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 Q8TCH9 128 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 ZNF518BQ9C0D4 1074 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 MRPL46Q9H2W6 279 aaKnown RBP3.96□□□□□ -1.78
SNHG1-202ENST00000535689 GSTO2Q9H4Y5 243 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 AGO3Q9H9G7 860 aaKnown RBP3.96□□□□□ -1.78
SNHG1-202ENST00000535689 RUVBL1Q9Y265 456 aaKnown RBP3.96□□□□□ -1.78
SNHG1-202ENST00000535689 MED16Q9Y2X0 877 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 PCDHA1Q9Y5I3 950 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 SNX13Q9Y5W8 968 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 COMMD10Q9Y6G5 202 aa3.96□□□□□ -1.78
SNHG1-202ENST00000535689 TTC21BQ7Z4L5 1316 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 CPSF1Q10570 1443 aaKnown RBP3.95□□□□□ -1.78
SNHG1-202ENST00000535689 SLIT3O75094 1523 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 KIF13BQ9NQT8 1826 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 QRICH2Q9H0J4 1663 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 FAM208AQ9UK61 1670 aaKnown RBP3.95□□□□□ -1.78
SNHG1-202ENST00000535689 PXDNLA1KZ92 1463 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 A0A0G2JLW4 131 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 RHPN2P1A8MT19 583 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 FOXS1O43638 330 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 ORC4O43929 436 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 MAP4K4O95819 1239 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-202ENST00000535689 GJB1P08034 283 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 MYF5P13349 255 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 BRAFP15056 766 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 HK1P19367 917 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 GCSHP23434 173 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 PCSK1P29120 753 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 WNT3P56703 355 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 SOX8P57073 446 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 NOMO3P69849 1222 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 SEMA5AQ13591 1074 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 UBE4AQ14139 1066 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 CNGA2Q16280 664 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 BEND5Q7L4P6 421 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 CLNKQ7Z7G1 428 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 ZGPATQ8N5A5 531 aaKnown RBP3.95□□□□□ -1.78
SNHG1-202ENST00000535689 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 RAPGEF4Q8WZA2 1011 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 IP6K1Q92551 441 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 PHKBQ93100 1093 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 CEP95Q96GE4 821 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 ABHD8Q96I13 439 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 RBM15Q96T37 977 aaKnown RBP eCLIP3.95□□□□□ -1.78
SNHG1-202ENST00000535689 SLC46A2Q9BY10 475 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 KCNH6Q9H252 994 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 ADAM7Q9H2U9 754 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 ARMT1Q9H993 441 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 GPR35Q9HC97 309 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 ARFGAP3Q9NP61 516 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 SLAMF7Q9NQ25 335 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 A1CFQ9NQ94 594 aaKnown RBP3.95□□□□□ -1.78
SNHG1-202ENST00000535689 AFF4Q9UHB7 1163 aaKnown RBP3.95□□□□□ -1.78
SNHG1-202ENST00000535689 CPA4Q9UI42 421 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 DMTF1Q9Y222 760 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 MTO1Q9Y2Z2 717 aaKnown RBP3.95□□□□□ -1.78
SNHG1-202ENST00000535689 TMX2Q9Y320 296 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 PDE4DIPQ5VU43 2346 aa3.95□□□□□ -1.78
SNHG1-202ENST00000535689 XDHP47989 1333 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms