RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 HS2ST1Q7LGA3 356 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 XXYLT1Q8NBI6 393 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 OR5B17Q8NGF7 314 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 GOLGA5Q8TBA6 731 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 FUBP3Q96I24 572 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCDC60-202ENST00000535685 CEP295NLQ96MC4 621 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 IER2Q9BTL4 223 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 BCO2Q9BYV7 579 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 MTMR12Q9C0I1 747 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 TASP1Q9H6P5 420 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 HPSEQ9Y251 543 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 MYO15AQ9UKN7 3530 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 COL4A3Q01955 1670 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 CEP250Q9BV73 2442 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 MYH10P35580 1976 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 PRR23AA6NEV1 266 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 FAM170BA6NMN3 283 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 F11P03951 625 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 CSH1P0DML2 217 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 CSH2P0DML3 217 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 HMGA1P17096 107 aaKnown RBP11.58□□□□□ -0.56
CCDC60-202ENST00000535685 NDUFV2P19404 249 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 DDX6P26196 483 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCDC60-202ENST00000535685 TARSP26639 723 aaKnown RBP11.58□□□□□ -0.56
CCDC60-202ENST00000535685 GABRR2P28476 465 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 VIPR2P41587 438 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 MAGEA11P43364 429 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 CYP24A1Q07973 514 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 BFSP1Q12934 665 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 CUL4BQ13620 913 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 SOWAHAQ2M3V2 549 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 ARHGAP15Q53QZ3 475 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 SWT1Q5T5J6 900 aaKnown RBP11.58□□□□□ -0.56
CCDC60-202ENST00000535685 SCARA3Q6AZY7 606 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 TPRG1Q6ZUI0 275 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 SLC9A9Q8IVB4 645 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 ARID3BQ8IVW6 561 aaPredicted RBP11.58□□□□□ -0.56
CCDC60-202ENST00000535685 CEP57L1Q8IYX8 460 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 NKD2Q969F2 451 aaPredicted RBP11.58□□□□□ -0.56
CCDC60-202ENST00000535685 HPDLQ96IR7 371 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 MYRFLQ96LU7 910 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 SEPT5Q99719 369 aaPredicted RBP11.58□□□□□ -0.56
CCDC60-202ENST00000535685 ATXN3LQ9H3M9 355 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 HEBP1Q9NRV9 189 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 TMLHEQ9NVH6 421 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 DDX43Q9NXZ2 648 aaKnown RBP11.58□□□□□ -0.56
CCDC60-202ENST00000535685 FBXO4Q9UKT5 387 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 ZDHHC9Q9Y397 364 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 MTF2Q9Y483 593 aaPredicted RBP11.58□□□□□ -0.56
CCDC60-202ENST00000535685 SNX9Q9Y5X1 595 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 ATG2BQ96BY7 2078 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 NCANO14594 1321 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 PTPRJQ12913 1337 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 SPAG17Q6Q759 2223 aa11.58□□□□□ -0.56
CCDC60-202ENST00000535685 HELZP42694 1942 aaKnown RBP11.57□□□□□ -0.56
CCDC60-202ENST00000535685 ZNF263O14978 683 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 TACC1O75410 805 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 SOAT2O75908 522 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 KRT19P08727 400 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 SP9P0CG40 484 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 WARSP23381 471 aaKnown RBP11.57□□□□□ -0.56
CCDC60-202ENST00000535685 GDI1P31150 447 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 AFMP43652 599 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 RPL10AP62906 217 aaKnown RBP11.57□□□□□ -0.56
CCDC60-202ENST00000535685 CLDN10P78369 228 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 KRT85P78386 507 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 GRM2Q14416 872 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 UBXN2BQ14CS0 331 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 FOXD4L6Q3SYB3 417 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-202ENST00000535685 ARHGAP29Q52LW3 1261 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 GPR158Q5T848 1215 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 DMRTA1Q5VZB9 504 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 FOXD4L3Q6VB84 417 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-202ENST00000535685 ASCL5Q7RTU5 278 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 TRAPPC11Q7Z392 1133 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 FRMD5Q7Z6J6 570 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 TMEM150AQ86TG1 271 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 OSTM1Q86WC4 334 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 ADGRF2Q8IZF7 708 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 MAML2Q8IZL2 1156 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-202ENST00000535685 KBTBD7Q8WVZ9 684 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 NELL1Q92832 810 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 RSPRY1Q96DX4 576 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 TRMT2BQ96GJ1 504 aaKnown RBP11.57□□□□□ -0.56
CCDC60-202ENST00000535685 PAGE5Q96GU1 130 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 CGRRF1Q99675 332 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 LPIN3Q9BQK8 851 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 GZF1Q9H116 711 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-202ENST00000535685 BLZF1Q9H2G9 400 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 SLITRK6Q9H5Y7 841 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 C8orf33Q9H7E9 229 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-202ENST00000535685 VRTNQ9H8Y1 702 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 SLC39A2Q9NP94 309 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 DMAC2Q9NW81 257 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 ABI2Q9NYB9 513 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-202ENST00000535685 SERTAD1Q9UHV2 236 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 CDH9Q9ULB4 789 aa11.57□□□□□ -0.56
CCDC60-202ENST00000535685 R3HCC1Q9Y3T6 440 aaKnown RBP11.57□□□□□ -0.56
CCDC60-202ENST00000535685 ATP6V1DQ9Y5K8 247 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms