RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 MAN2B1O00754 1011 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 CLGNO14967 610 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 LAMTOR5O43504 91 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 ACTN4O43707 911 aaKnown RBP9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 CLSTN1O94985 981 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 SLFN14P0C7P3 912 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 PFKFB1P16118 471 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 CYP2F1P24903 491 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 PCSK1P29120 753 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 MAGEA9P43362 315 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 LHX1P48742 406 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 KPNA1P52294 538 aaPredicted RBP9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 SNRPFP62306 86 aaKnown RBP9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 CYP24A1Q07973 514 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 CCDC142Q17RM4 750 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 BMT2Q1RMZ1 405 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 SOWAHAQ2M3V2 549 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 TRAPPC11Q7Z392 1133 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 SPATA2LQ8IUW3 424 aaPredicted RBP9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 XXYLT1Q8NBI6 393 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 SPATA18Q8TC71 538 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 LEO1Q8WVC0 666 aaPredicted RBP9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 FAM3CQ92520 227 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 CCDC127Q96BQ5 260 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 PAGE5Q96GU1 130 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 ZFYVE19Q96K21 471 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 SPATA32Q96LK8 384 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 MMS19Q96T76 1030 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 NELL2Q99435 816 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 CGRRF1Q99675 332 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 SMG9Q9H0W8 520 aaKnown RBP9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 TASP1Q9H6P5 420 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 EXOC1Q9NV70 894 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 GTF3C4Q9UKN8 822 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 KIF26AQ9ULI4 1882 aaPredicted RBP9.15□□□□□ -0.95
SFSWAP-202ENST00000535202 FANCMQ8IYD8 2048 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 MYBPHLA2RUH7 354 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 SLC38A8A6NNN8 435 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 ARNTLO00327 626 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 GABRDO14764 452 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 CHADO15335 359 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 KLRC4O43908 158 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 EXOC3O60645 756 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 ATP2C2O75185 946 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 PRAMEF12O95522 483 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 PTMAP06454 111 aaKnown RBP9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 CSH1P0DML2 217 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 CSH2P0DML3 217 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 HMGA1P17096 107 aaKnown RBP9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 CCNE1P24864 410 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 SOX9P48436 509 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 NLRP12P59046 1061 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 PSMC1P62191 440 aaKnown RBP9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 RPL10AP62906 217 aaKnown RBP9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 KRT85P78386 507 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 CSTF1Q05048 431 aaKnown RBP9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 FCHO2Q0JRZ9 810 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 PSMD6Q15008 389 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 DDR2Q16832 855 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 KNOP1Q1ED39 458 aaKnown RBP9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 KMT5BQ4FZB7 885 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 ZC3H14Q6PJT7 736 aaKnown RBP9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 SCN4BQ8IWT1 228 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 MAML2Q8IZL2 1156 aaPredicted RBP9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 ADSSL1Q8N142 457 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 MAB21L3Q8N8X9 362 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 KIAA0895Q8NCT3 520 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 TTC8Q8TAM2 541 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 BPIFB1Q8TDL5 484 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 KBTBD7Q8WVZ9 684 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 CLDN23Q96B33 292 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 LRRC3BQ96PB8 259 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 PKMYT1Q99640 499 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 SYT15Q9BQS2 421 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 ABCB6Q9NP58 842 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 TRPV5Q9NQA5 729 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 OBP2AQ9NY56 170 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 BCCIPQ9P287 314 aaKnown RBP eCLIP9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 CDH9Q9ULB4 789 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 PIEZO1Q92508 2521 aa9.14□□□□□ -0.95
SFSWAP-202ENST00000535202 CACNA1IQ9P0X4 2223 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 PTPRDP23468 1912 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 PHACTR2O75167 634 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 NOL4O94818 638 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 CST3P01034 146 aaPredicted RBP9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 LMNAP02545 664 aaKnown RBP9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 F11P03951 625 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 PDGFRBP09619 1106 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 WARSP23381 471 aaKnown RBP9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 CMA1P23946 247 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 LMO2P25791 158 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 AVPR1AP37288 418 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 RPS9P46781 194 aaKnown RBP9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 CASP4P49662 377 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 TNNC1P63316 161 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 CYP27A1Q02318 531 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 STK4Q13043 487 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 MTAPQ13126 283 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 FZD5Q13467 585 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms