RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 SOBPA7XYQ1 873 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 PDGFRBP09619 1106 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 DDX6P26196 483 aaKnown RBP eCLIP9.54□□□□□ -0.883e-6■■■□□ 19.2
COPB1-211ENST00000534234 CTHP32929 405 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 CXCL12P48061 93 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 TNK2Q07912 1038 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 PPP2R5DQ14738 602 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 PSMD6Q15008 389 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 FAM171BQ6P995 826 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 TXNDC11Q6PKC3 985 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 C4orf50Q6ZRC1 276 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 LIMS2Q7Z4I7 341 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 SCN4BQ8IWT1 228 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 KIAA2013Q8IYS2 634 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 CEP57L1Q8IYX8 460 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 KBTBD7Q8WVZ9 684 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 USP13Q92995 863 aaPredicted RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 FUBP3Q96I24 572 aaKnown RBP eCLIP9.54□□□□□ -0.88
COPB1-211ENST00000534234 MYRFLQ96LU7 910 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 IER2Q9BTL4 223 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 FAM126AQ9BYI3 521 aaPredicted RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 PRMT8Q9NR22 394 aaPredicted RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 TDP1Q9NUW8 608 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 MAGEC2Q9UBF1 373 aaPredicted RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 UXTQ9UBK9 157 aaPredicted RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 SERTAD1Q9UHV2 236 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 CCL26Q9Y258 94 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 EXOC3O60645 756 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 LILRB5O75023 590 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 NOL4O94818 638 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 SLFN14P0C7P3 912 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 GNL1P36915 607 aaPredicted RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 ID4P47928 161 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 CCR3P51677 355 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 NRLP54845 237 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 PSMC1P62191 440 aaKnown RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 CYP24A1Q07973 514 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 LRRC32Q14392 662 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 GAS6Q14393 721 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 PON2Q15165 354 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 MAPRE1Q15691 268 aaKnown RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 KNOP1Q1ED39 458 aaKnown RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 BMT2Q1RMZ1 405 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 ITPRIPL2Q3MIP1 535 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 WDR72Q3MJ13 1102 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 DGKKQ5KSL6 1271 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 CC2D1AQ6P1N0 951 aaPredicted RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 GRAMD1CQ8IYS0 662 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 SPEM1Q8N4L4 309 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 TRMT2BQ96GJ1 504 aaKnown RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 CGRRF1Q99675 332 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 FAM83CQ9BQN1 747 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 SYT15Q9BQS2 421 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 CRTAC1Q9NQ79 661 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 RBM12Q9NTZ6 932 aaKnown RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 CGNQ9P2M7 1197 aaKnown RBP9.54□□□□□ -0.88
COPB1-211ENST00000534234 CDH9Q9ULB4 789 aa9.54□□□□□ -0.88
COPB1-211ENST00000534234 UBE4BO95155 1302 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 RIF1Q5UIP0 2472 aaKnown RBP9.53□□□□□ -0.88
COPB1-211ENST00000534234 MYH15Q9Y2K3 1946 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 FAM163BP0C2L3 166 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 WARSP23381 471 aaKnown RBP9.53□□□□□ -0.88
COPB1-211ENST00000534234 BDNFP23560 247 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 GRIK1P39086 918 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 MAGEA11P43364 429 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 SATB1Q01826 763 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 STK4Q13043 487 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 TRPC3Q13507 836 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 RUNX3Q13761 415 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 WDR44Q5JSH3 913 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 VSTM1Q6UX27 236 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 C12orf56Q8IXR9 622 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 FSIP1Q8NA03 581 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 OR6B3Q8NGW1 331 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 ZNF516Q92618 1163 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 MYLPFQ96A32 169 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 PAGE5Q96GU1 130 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 CYP2S1Q96SQ9 504 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 MRPL45Q9BRJ2 306 aaKnown RBP9.53□□□□□ -0.88
COPB1-211ENST00000534234 SNX25Q9H3E2 840 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 EBF3Q9H4W6 596 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 KIF9Q9HAQ2 790 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 TRPC7Q9HCX4 862 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 NCDNQ9UBB6 729 aa9.53□□□□□ -0.88
COPB1-211ENST00000534234 PDCD11Q14690 1871 aaKnown RBP9.52□□□□□ -0.88
COPB1-211ENST00000534234 A0A1B0GVL5 298 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 ACTN4O43707 911 aaKnown RBP9.52□□□□□ -0.89
COPB1-211ENST00000534234 KLRC4O43908 158 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 PHACTR2O75167 634 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 TACC1O75410 805 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 USP17L7P0C7H9 530 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 TDGF1P13385 188 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 CMA1P23946 247 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 TNNC1P63316 161 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 CYP27A1Q02318 531 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 PSMD2Q13200 908 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 CCINQ13939 588 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 ZNF268Q14587 947 aaPredicted RBP9.52□□□□□ -0.89
COPB1-211ENST00000534234 TRIM68Q6AZZ1 485 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 Q6ZS52 159 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms