RNA–Protein interactions for RNA: ENST00000534190.5

PPP6R3-225, Transcript of protein phosphatase 6 regulatory subunit 3, human

TSL 2

Gene PPP6R3, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R3-225	ENST00000534190	TAOK1	Q7L7X3	1001 aa		13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	SDR16C5	Q8N3Y7	309 aa		13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	NME8	Q8N427	588 aa		13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	RNF149	Q8NC42	400 aa		13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	GFM2	Q969S9	779 aa	Known RBP	13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	GRAMD1A	Q96CP6	724 aa		13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	PAWR	Q96IZ0	340 aa	Known RBP	13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	ARPC5L	Q9BPX5	153 aa		13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	DDX23	Q9BUQ8	820 aa	Known RBP	13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	TMEM109	Q9BVC6	243 aa		13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	SLITRK6	Q9H5Y7	841 aa		13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	C17orf75	Q9HAS0	396 aa		13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	DDX43	Q9NXZ2	648 aa	Known RBP	13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	NOD1	Q9Y239	953 aa		13.65	□□□□□ -0.22
PPP6R3-225	ENST00000534190	AKR1B10	O60218	316 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	B4GALT4	O60513	344 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	AFP	P02771	609 aa	Known RBP	13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	ALOX15	P16050	662 aa	Predicted RBP	13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	EN2	P19622	333 aa	Predicted RBP	13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	MLH1	P40692	756 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	NAMPT	P43490	491 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	RASSF2	P50749	326 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	NCKAP1L	P55160	1127 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	NLRP11	P59045	1033 aa	Known RBP	13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	PTPN11	Q06124	597 aa	Predicted RBP	13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	DHX9	Q08211	1270 aa	Known RBP	13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	CNGA2	Q16280	664 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	KIZ	Q2M2Z5	673 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	SPDYA	Q5MJ70	313 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	HAUS6	Q7Z4H7	955 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	SERINC5	Q86VE9	423 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	CCNJL	Q8IV13	435 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	NELFCD	Q8IXH7	590 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	PPFIBP2	Q8ND30	876 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	TMEM161B	Q8NDZ6	487 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	DEPTOR	Q8TB45	409 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	SCFD1	Q8WVM8	642 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.64	□□□□□ -0.23	4e-7	■■□□□ 13.3
PPP6R3-225	ENST00000534190	NTPCR	Q9BSD7	190 aa	Known RBP	13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	IKZF4	Q9H2S9	585 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190	GINS2	Q9Y248	185 aa		13.64	□□□□□ -0.23
PPP6R3-225	ENST00000534190		A0A087WZ62	844 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190		A0A0J9YVX5	310 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	DENND3	A2RUS2	1198 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	RGS16	O15492	202 aa	Predicted RBP	13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	CSDE1	O75534	798 aa	Known RBP	13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	COL6A1	P12109	1028 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	CDK7	P50613	346 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	PLOD1	Q02809	727 aa	Predicted RBP	13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	CLPP	Q16740	277 aa	Predicted RBP	13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	SLC44A4	Q53GD3	710 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	SLC39A5	Q6ZMH5	540 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	KLHL7	Q8IXQ5	586 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	ADSSL1	Q8N142	457 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	ANKLE1	Q8NAG6	615 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	ACTRT1	Q8TDG2	376 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	NLRP7	Q8WX94	980 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	HAUS1	Q96CS2	278 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	NEUROG2	Q9H2A3	272 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	CDHR5	Q9HBB8	845 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	ARHGAP20	Q9P2F6	1191 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	KLHL14	Q9P2G3	628 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	HSFX1	Q9UBD0	423 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	SSU72P8	A0A1W2PR75	194 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	PABPC4L	P0CB38	370 aa	Known RBP	13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	HOXD13	P35453	343 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	EIF4A3	P38919	411 aa	Known RBP	13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	SERPINB8	P50452	374 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	GPC3	P51654	580 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	PPARD	Q03181	441 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	ITGA9	Q13797	1035 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	MYBPC2	Q14324	1141 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	TAF2	Q6P1X5	1199 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	OLFML1	Q6UWY5	402 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	MYOCD	Q8IZQ8	938 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	TAF4B	Q92750	862 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	STRA6	Q9BX79	667 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	EPB41L1	Q9H4G0	881 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	TRIM33	Q9UPN9	1127 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	CHMP2B	Q9UQN3	213 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	PCDHB13	Q9Y5F0	798 aa		13.63	□□□□□ -0.23
PPP6R3-225	ENST00000534190	TRAFD1	O14545	582 aa	Predicted RBP	13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	HNRNPCL1	O60812	293 aa	Known RBP	13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	PQBP1	O60828	265 aa	Known RBP	13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	GPR32	O75388	356 aa		13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	MAPT	P10636	758 aa	Known RBP	13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	CPA3	P15088	417 aa		13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	GTF2B	Q00403	316 aa		13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	ADCY1	Q08828	1119 aa		13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	TFDP1	Q14186	410 aa		13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	CCDC6	Q16204	474 aa		13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	ZC3H18	Q86VM9	953 aa	Known RBP	13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	GUF1	Q8N442	669 aa	Known RBP	13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	SLC17A8	Q8NDX2	589 aa		13.62	□□□□□ -0.23
PPP6R3-225	ENST00000534190	NAT14	Q8WUY8	206 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms