RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-210ENST00000534172 PLEKHM1Q9Y4G2 1056 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 NWD1Q149M9 1564 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 RICTORQ6R327 1708 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 USP19O94966 1318 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 DYTNA2CJ06 578 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-210ENST00000534172 M0R3H8 397 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 CLGNO14967 610 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 FGF18O76093 207 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 PTGS2P35354 604 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 BMPR1AP36894 532 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 TECP42680 631 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 KCNJ5P48544 419 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 BLOC1S1P78537 153 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 PMS2P11Q13670 270 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 BLMHQ13867 455 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 CCDC184Q52MB2 194 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 PRRT2Q7Z6L0 340 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-210ENST00000534172 SH2D3CQ8N5H7 860 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 CCDC33Q8N5R6 958 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 PPHLN1Q8NEY8 458 aaKnown RBP4.12□□□□□ -1.75
CSMD3-210ENST00000534172 RAB24Q969Q5 203 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 BOD1Q96IK1 185 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 FBXO34Q9NWN3 711 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 PRDM4Q9UKN5 801 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 SORCS3Q9UPU3 1222 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 NOX1Q9Y5S8 564 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 WIZO95785 1651 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 EFCAB5A4FU69 1503 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 F8W8V4 182 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 ADAMTS3O15072 1205 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 ADRB1P08588 477 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 KITP10721 976 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 CYP2C9P11712 490 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 GEMIN4P57678 1058 aaKnown RBP4.11□□□□□ -1.75
CSMD3-210ENST00000534172 RNASE9P60153 205 aaKnown RBP4.11□□□□□ -1.75
CSMD3-210ENST00000534172 TOB2Q14106 344 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-210ENST00000534172 NRN1LQ496H8 165 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 TSHZ3Q63HK5 1081 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 ZNF772Q68DY9 489 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-210ENST00000534172 RNF207Q6ZRF8 634 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 RNF152Q8N8N0 203 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 OR6B3Q8NGW1 331 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 BRI3BPQ8WY22 251 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 TNPO1Q92973 898 aaKnown RBP4.11□□□□□ -1.75
CSMD3-210ENST00000534172 LENG9Q96B70 501 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 TMEM41AQ96HV5 264 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 TBATAQ96M53 351 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 MYOCQ99972 504 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 TTLL2Q9BWV7 592 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 ZNF287Q9HBT7 754 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 PNPLA8Q9NP80 782 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 RRN3Q9NYV6 651 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 KCNE5Q9UJ90 142 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 OGDHLQ9ULD0 1010 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 MAGED2Q9UNF1 606 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-210ENST00000534172 MED16Q9Y2X0 877 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 PCDHA1Q9Y5I3 950 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 AKNAQ7Z591 1439 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 CDHR4A6H8M9 788 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 RPS6KA4O75676 772 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 AGFG2O95081 481 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 SCAF4O95104 1147 aaKnown RBP4.11□□□□□ -1.75
CSMD3-210ENST00000534172 APOBEC3AP31941 199 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-210ENST00000534172 FMO1Q01740 532 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 TCF15Q12870 199 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 PPFIA1Q13136 1202 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 DAG1Q14118 895 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 STARD3Q14849 445 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 ICE2Q659A1 982 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 PGBD2Q6P3X8 592 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 ZNF783Q6ZMS7 281 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 SYTL1Q8IYJ3 562 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 ZNF527Q8NB42 609 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 IL17REQ8NFR9 667 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 CPT1CQ8TCG5 803 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 SKA1Q96BD8 255 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 TBC1D20Q96BZ9 403 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 UNKQ9C0B0 810 aaKnown RBP4.11□□□□□ -1.75
CSMD3-210ENST00000534172 TRPM5Q9NZQ8 1165 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 CHST2Q9Y4C5 530 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 BCL9LQ86UU0 1499 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 SHANK2Q9UPX8 1470 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 RAPGEF2Q9Y4G8 1499 aa4.11□□□□□ -1.75
CSMD3-210ENST00000534172 TOP2AP11388 1531 aaKnown RBP4.1□□□□□ -1.75
CSMD3-210ENST00000534172 MAGI2Q86UL8 1455 aa4.1□□□□□ -1.75
CSMD3-210ENST00000534172 A0A1B0GTW7 788 aa4.1□□□□□ -1.75
CSMD3-210ENST00000534172 MYADML2A6NDP7 307 aa4.1□□□□□ -1.75
CSMD3-210ENST00000534172 GRXCR1A8MXD5 290 aa4.1□□□□□ -1.75
CSMD3-210ENST00000534172 MYO1FO00160 1098 aa4.1□□□□□ -1.75
CSMD3-210ENST00000534172 APOL1O14791 398 aa4.1□□□□□ -1.75
CSMD3-210ENST00000534172 TBC1D4O60343 1298 aa4.1□□□□□ -1.75
CSMD3-210ENST00000534172 IL18RAPO95256 599 aa4.1□□□□□ -1.75
CSMD3-210ENST00000534172 CSTBP04080 98 aaKnown RBP4.1□□□□□ -1.75
CSMD3-210ENST00000534172 ITGB1P05556 798 aa4.1□□□□□ -1.75
CSMD3-210ENST00000534172 EN2P19622 333 aaPredicted RBP4.1□□□□□ -1.75
CSMD3-210ENST00000534172 SLC7A1P30825 629 aa4.1□□□□□ -1.75
CSMD3-210ENST00000534172 COPB2P35606 906 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms