RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 FAM167AQ96KS9 214 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 CEP170P1Q96L14 293 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 FBXL18Q96ME1 805 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 PANX2Q96RD6 677 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 GPR20Q99678 358 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 MCMBPQ9BTE3 642 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 TARS2Q9BW92 718 aaKnown RBP6.2□□□□□ -1.42
CHKA-208ENST00000533910 IRF2BPLQ9H1B7 796 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 NDST4Q9H3R1 872 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 DHX33Q9H6R0 707 aaKnown RBP6.2□□□□□ -1.42
CHKA-208ENST00000533910 ATP6V0A4Q9HBG4 840 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 AGPAT3Q9NRZ7 376 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 DMAC2Q9NW81 257 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 CGNQ9P2M7 1197 aaKnown RBP6.2□□□□□ -1.42
CHKA-208ENST00000533910 NDOR1Q9UHB4 597 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 KCNG1Q9UIX4 513 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 RNF112Q9ULX5 631 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 SIK3Q9Y2K2 1263 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.2□□□□□ -1.42
CHKA-208ENST00000533910 A0A1W2PQJ5 194 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 AKR1B15C9JRZ8 316 aaPredicted RBP6.19□□□□□ -1.42
CHKA-208ENST00000533910 PLD2O14939 933 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 ARHGAP6O43182 974 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 NRDCO43847 1150 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 STX10O60499 249 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 PRAMEF1O95521 474 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 SNAI1O95863 264 aaPredicted RBP6.19□□□□□ -1.42
CHKA-208ENST00000533910 TPM1P09493 284 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 HOXC6P09630 235 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 FGFR1P11362 822 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 CASP14P31944 242 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 ABCD1P33897 745 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 TCF7P36402 384 aaPredicted RBP6.19□□□□□ -1.42
CHKA-208ENST00000533910 ETV3P41162 512 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 NPTX2P47972 431 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 CDKN1CP49918 316 aaPredicted RBP6.19□□□□□ -1.42
CHKA-208ENST00000533910 SLC26A2P50443 739 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 FXR1P51114 621 aaKnown RBP eCLIP6.19□□□□□ -1.42
CHKA-208ENST00000533910 STAT5BP51692 787 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 INHBEP58166 350 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 SNRPFP62306 86 aaKnown RBP6.19□□□□□ -1.42
CHKA-208ENST00000533910 ARHGAP1Q07960 439 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 GOLGA8FQ08AF8 430 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 GOLGA8DPQ0D2H9 430 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 SREBF2Q12772 1141 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 DMP1Q13316 513 aaPredicted RBP6.19□□□□□ -1.42
CHKA-208ENST00000533910 ADAM9Q13443 819 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 NOLC1Q14978 699 aaKnown RBP eCLIP6.19□□□□□ -1.42
CHKA-208ENST00000533910 EMC2Q15006 297 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 SYCP1Q15431 976 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 LY6KQ17RY6 165 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 PLEKHG6Q3KR16 790 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 CCDC40Q4G0X9 1142 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 ZC2HC1CQ53FD0 456 aaPredicted RBP6.19□□□□□ -1.42
CHKA-208ENST00000533910 FKBP15Q5T1M5 1219 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 FAM102BQ5T8I3 360 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 DENND5AQ6IQ26 1287 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 C17orf99Q6UX52 265 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 FAM214BQ7L5A3 538 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 PLPPR4Q7Z2D5 763 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 PCGF5Q86SE9 256 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 C17orf53Q8N3J3 647 aaPredicted RBP6.19□□□□□ -1.42
CHKA-208ENST00000533910 TMEM145Q8NBT3 493 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 SMC1BQ8NDV3 1235 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 TMEM161BQ8NDZ6 487 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 ATP8B4Q8TF62 1192 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 USP6NLQ92738 828 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 BORCS6Q96GS4 357 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 MAML3Q96JK9 1138 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 HEXIM2Q96MH2 286 aaKnown RBP6.19□□□□□ -1.42
CHKA-208ENST00000533910 ACCSQ96QU6 501 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 SH2D3AQ9BRG2 576 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 NTPCRQ9BSD7 190 aaKnown RBP6.19□□□□□ -1.42
CHKA-208ENST00000533910 NUP58Q9BVL2 599 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 YIPF2Q9BWQ6 316 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 NAA15Q9BXJ9 866 aaKnown RBP6.19□□□□□ -1.42
CHKA-208ENST00000533910 TMEM206Q9H813 350 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 POLD4Q9HCU8 107 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 GPRC5CQ9NQ84 441 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 ARHGAP28Q9P2N2 729 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 FAM184BQ9ULE4 1060 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 PLAAQ9Y263 795 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 TRAF6Q9Y4K3 522 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 U3KQE9 123 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 ADGRA3Q8IWK6 1321 aa6.19□□□□□ -1.42
CHKA-208ENST00000533910 IGKV6-21A0A0C4DH24 114 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 TTC26A0AVF1 554 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 HMX2A2RU54 273 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 RASSF10A6NK89 507 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 H0YCG3 227 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 MAPK13O15264 365 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 TLR2O60603 784 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 DNAJC8O75937 253 aaPredicted RBP6.18□□□□□ -1.42
CHKA-208ENST00000533910 AKAP3O75969 853 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 SNRPB2P08579 225 aaKnown RBP6.18□□□□□ -1.42
CHKA-208ENST00000533910 TXNP10599 105 aaKnown RBP6.18□□□□□ -1.42
CHKA-208ENST00000533910 EPB41P11171 864 aaKnown RBP6.18□□□□□ -1.42
CHKA-208ENST00000533910 BDNFP23560 247 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 ARL2P36404 184 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 TM4SF4P48230 202 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms