RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 FSTL1Q12841 308 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 PPP1R15BQ5SWA1 713 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 NUDCD1Q96RS6 583 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 IMPG2Q9BZV3 1241 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 SLC5A4Q9NY91 659 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 ATP2A1O14983 1001 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 TBC1D12O60347 775 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 C1QBPQ07021 282 aaKnown RBP20.3■□□□□ 0.84
CAPN1-226ENST00000533820 LRRC23Q53EV4 343 aaPredicted RBP20.3■□□□□ 0.84
CAPN1-226ENST00000533820 DPH6Q7L8W6 267 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 RFWD2Q8NHY2 731 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 OSBPL1AQ9BXW6 950 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 C17orf75Q9HAS0 396 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 GINM1Q9NU53 330 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 CLUHO75153 1309 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 hCG_1818297A0A087WSY0 165 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 ZSCAN9O15535 394 aaPredicted RBP20.3■□□□□ 0.84
CAPN1-226ENST00000533820 CST8O60676 142 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 OATP04181 439 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 ABHD2P08910 425 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 MAGEA10P43363 369 aaPredicted RBP20.3■□□□□ 0.84
CAPN1-226ENST00000533820 TFDP3Q5H9I0 405 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 TRIM72Q6ZMU5 477 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 NLRP9Q7RTR0 991 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 CCDC125Q86Z20 511 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 TFAP2BQ92481 460 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 PLEKHG4BQ96PX9 1271 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 PDLIM7Q9NR12 457 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 PSMC3IPQ9P2W1 217 aaPredicted RBP20.3■□□□□ 0.84
CAPN1-226ENST00000533820 NXF1Q9UBU9 619 aaKnown RBP20.3■□□□□ 0.84
CAPN1-226ENST00000533820 ZFP69BQ9UJL9 534 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 HSPA1LP34931 641 aa20.29■□□□□ 0.84
CAPN1-226ENST00000533820 ABL2P42684 1182 aa20.29■□□□□ 0.84
CAPN1-226ENST00000533820 MAGEA8P43361 318 aa20.29■□□□□ 0.84
CAPN1-226ENST00000533820 YARSP54577 528 aaKnown RBP20.29■□□□□ 0.84
CAPN1-226ENST00000533820 ACVR2BQ13705 512 aa20.29■□□□□ 0.84
CAPN1-226ENST00000533820 TCP10LQ8TDR4 215 aa20.29■□□□□ 0.84
CAPN1-226ENST00000533820 LPAR1Q92633 364 aa20.29■□□□□ 0.84
CAPN1-226ENST00000533820 PDGFDQ9GZP0 370 aaPredicted RBP20.29■□□□□ 0.84
CAPN1-226ENST00000533820 RFC1P35251 1148 aaPredicted RBP20.29■□□□□ 0.84
CAPN1-226ENST00000533820 BASP1P80723 227 aaKnown RBP20.29■□□□□ 0.84
CAPN1-226ENST00000533820 RIBC1Q8N443 379 aaPredicted RBP20.29■□□□□ 0.84
CAPN1-226ENST00000533820 C10orf82Q8WW14 230 aa20.29■□□□□ 0.84
CAPN1-226ENST00000533820 SLC7A6OSQ96CW6 309 aaPredicted RBP20.29■□□□□ 0.84
CAPN1-226ENST00000533820 TTC25Q96NG3 672 aa20.29■□□□□ 0.84
CAPN1-226ENST00000533820 CHMP2BQ9UQN3 213 aa20.29■□□□□ 0.84
CAPN1-226ENST00000533820 CFAP69A5D8W1 941 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 PIK3R2O00459 728 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 ALOX15BO15296 676 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 PDHA1P08559 390 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 CDKN2BP42772 138 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 TFAMQ00059 246 aaKnown RBP20.28■□□□□ 0.84
CAPN1-226ENST00000533820 MORF4L2Q15014 288 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 TAF5Q15542 800 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 OASLQ15646 514 aaKnown RBP20.28■□□□□ 0.84
CAPN1-226ENST00000533820 LRRC6Q86X45 466 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 RELL1Q8IUW5 271 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 FBXO36Q8NEA4 188 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 LRRN4Q8WUT4 740 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 PAFAH2Q99487 392 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 ZFATQ9P243 1243 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 COL2A1P02458 1487 aaPredicted RBP20.28■□□□□ 0.84
CAPN1-226ENST00000533820 DPPA5A6NC42 116 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 PSMA2P25787 234 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 PALM2Q8IXS6 379 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 FAM71DQ8N9W8 422 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 JOSD2Q8TAC2 188 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 PRR11Q96HE9 360 aaPredicted RBP20.28■□□□□ 0.84
CAPN1-226ENST00000533820 YIPF2Q9BWQ6 316 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 LRMDAQ9H2I8 198 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 SPDYE5A6NIY4 337 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 PRPF4O43172 522 aaKnown RBP eCLIP20.28■□□□□ 0.842e-6■■■□□ 17.7
CAPN1-226ENST00000533820 TYROBPO43914 113 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 HMGCS2P54868 508 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 GEMIN4P57678 1058 aaKnown RBP20.28■□□□□ 0.84
CAPN1-226ENST00000533820 MXRA7P84157 204 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 NR1H3Q13133 447 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 RFWD3Q6PCD5 774 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 NSUN6Q8TEA1 469 aaKnown RBP20.28■□□□□ 0.84
CAPN1-226ENST00000533820 RSAD2Q8WXG1 361 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 PTPRN2Q92932 1015 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 CISHQ9NSE2 258 aa20.28■□□□□ 0.84
CAPN1-226ENST00000533820 SMG5Q9UPR3 1016 aaKnown RBP20.28■□□□□ 0.84
CAPN1-226ENST00000533820 DCTN3O75935 186 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 MAP3K6O95382 1288 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 SRGAP2CP0DJJ0 459 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 IL1R2P27930 398 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 RAP1GAPP47736 663 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 TMEM62Q0P6H9 643 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 RFX8Q6ZV50 586 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 GPRASP2Q96D09 838 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 VCPIP1Q96JH7 1222 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 GORASP1Q9BQQ3 440 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 RABGEF1Q9UJ41 708 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 PEX11AO75192 247 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 IMPDH2P12268 514 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 BLMHQ13867 455 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 MFSD4BQ5TF39 518 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 ABHD15Q6UXT9 468 aa20.27■□□□□ 0.84
CAPN1-226ENST00000533820 FAM83AQ86UY5 434 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms