RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CYP4F2P78329 520 aa3.84□□□□□ -1.79
BRCA2-205ENST00000533776 EXOSC9Q06265 439 aaKnown RBP3.84□□□□□ -1.79
BRCA2-205ENST00000533776 ARHGAP40Q5TG30 622 aa3.84□□□□□ -1.79
BRCA2-205ENST00000533776 SFRP4Q6FHJ7 346 aaPredicted RBP3.84□□□□□ -1.79
BRCA2-205ENST00000533776 CNGA4Q8IV77 575 aa3.84□□□□□ -1.79
BRCA2-205ENST00000533776 PNLDC1Q8NA58 520 aaKnown RBP3.84□□□□□ -1.79
BRCA2-205ENST00000533776 CAMKK2Q96RR4 588 aa3.84□□□□□ -1.79
BRCA2-205ENST00000533776 SPRTNQ9H040 489 aaPredicted RBP3.84□□□□□ -1.79
BRCA2-205ENST00000533776 DUSP22Q9NRW4 184 aa3.84□□□□□ -1.79
BRCA2-205ENST00000533776 PCDHA1Q9Y5I3 950 aa3.84□□□□□ -1.79
BRCA2-205ENST00000533776 SLC16A6O15403 523 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 TYRP14679 529 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 MMP13P45452 471 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 CCT4P50991 539 aaKnown RBP3.83□□□□□ -1.8
BRCA2-205ENST00000533776 MAP2K6P52564 334 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 GPR162Q16538 588 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 LONRF3Q496Y0 759 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 CHSY1Q86X52 802 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 CYP2W1Q8TAV3 490 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 ATG4AQ8WYN0 398 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 C5orf34Q96MH7 638 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 SLC13A1Q9BZW2 595 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 GLOD4Q9HC38 313 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 PDGFCQ9NRA1 345 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 ELOVL5Q9NYP7 299 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 CCNL1Q9UK58 526 aaPredicted RBP3.83□□□□□ -1.8
BRCA2-205ENST00000533776 ADAMTS5Q9UNA0 930 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 SSX2IPQ9Y2D8 614 aa3.83□□□□□ -1.8
BRCA2-205ENST00000533776 SMIM35A0A1B0GVV1 85 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 MYO1FO00160 1098 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 PPEF2O14830 753 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 TOP3BO95985 862 aaKnown RBP3.82□□□□□ -1.8
BRCA2-205ENST00000533776 NPSP0C0P6 89 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 ATXN1LP0C7T5 689 aaKnown RBP3.82□□□□□ -1.8
BRCA2-205ENST00000533776 PXNP49023 591 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-205ENST00000533776 CCDC157Q569K6 752 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 RNF187Q5TA31 235 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-205ENST00000533776 RGS7BPQ6MZT1 257 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-205ENST00000533776 TRIM72Q6ZMU5 477 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 CATSPERGQ6ZRH7 1159 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 PRPF38AQ8NAV1 312 aaKnown RBP3.82□□□□□ -1.8
BRCA2-205ENST00000533776 BRIX1Q8TDN6 353 aaKnown RBP3.82□□□□□ -1.8
BRCA2-205ENST00000533776 XAGE5Q8WWM1 108 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 GLG1Q92896 1179 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 R3HDM4Q96D70 268 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 ASB2Q96Q27 587 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 FSD1LQ9BXM9 530 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 VPS16Q9H269 839 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 ANLNQ9NQW6 1124 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 PNPOQ9NVS9 261 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 SH2B3Q9UQQ2 575 aa3.82□□□□□ -1.8
BRCA2-205ENST00000533776 A1L4Q6 167 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 TRIM38O00635 465 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 ADAMTS3O15072 1205 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 KCNAB3O43448 404 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 UNC5CO95185 931 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 HDCP19113 662 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 PPIFP30405 207 aaKnown RBP3.81□□□□□ -1.8
BRCA2-205ENST00000533776 KCNJ5P48544 419 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 TPTEP56180 551 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 HOXA4Q00056 320 aaPredicted RBP3.81□□□□□ -1.8
BRCA2-205ENST00000533776 FHL1Q13642 323 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 IQCB1Q15051 598 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 MIS18BP1Q6P0N0 1132 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 USP45Q70EL2 814 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 TECPR1Q7Z6L1 1165 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 CATIPQ7Z7H3 387 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 PTDSS2Q9BVG9 487 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 PRSS22Q9GZN4 317 aa3.81□□□□□ -1.8
BRCA2-205ENST00000533776 H3BUI4 141 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 PDE8BO95263 885 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 GRPP07492 148 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 HOXB6P17509 224 aaKnown RBP3.8□□□□□ -1.8
BRCA2-205ENST00000533776 RECQLP46063 649 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-205ENST00000533776 SOX8P57073 446 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 GPSM2P81274 684 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 PLS1Q14651 629 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 RABEP1Q15276 862 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 FCRL6Q6DN72 434 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 Q6ZWC4 215 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 PARS2Q7L3T8 475 aaKnown RBP3.8□□□□□ -1.8
BRCA2-205ENST00000533776 GALNT16Q8N428 558 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 PRR18Q8N4B5 295 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 C8orf58Q8NAV2 365 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 DAZAP1Q96EP5 407 aaKnown RBP3.8□□□□□ -1.8
BRCA2-205ENST00000533776 RITA1Q96K30 269 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 FAM167AQ96KS9 214 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 TUBA8Q9NY65 449 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-205ENST00000533776 KLHL13Q9P2N7 655 aa3.8□□□□□ -1.8
BRCA2-205ENST00000533776 NDRG4Q9ULP0 352 aaKnown RBP3.8□□□□□ -1.8
BRCA2-205ENST00000533776 WASHC2CQ9Y4E1 1318 aa3.79□□□□□ -1.8
BRCA2-205ENST00000533776 ALG1L2C9J202 215 aa3.79□□□□□ -1.8
BRCA2-205ENST00000533776 hCG_1984214I3L0E3 225 aa3.79□□□□□ -1.8
BRCA2-205ENST00000533776 EXOC3O60645 756 aa3.79□□□□□ -1.8
BRCA2-205ENST00000533776 SNUPNO95149 360 aaKnown RBP3.79□□□□□ -1.8
BRCA2-205ENST00000533776 NTN1O95631 604 aa3.79□□□□□ -1.8
BRCA2-205ENST00000533776 IL33O95760 270 aa3.79□□□□□ -1.8
BRCA2-205ENST00000533776 PLCD1P51178 756 aa3.79□□□□□ -1.8
BRCA2-205ENST00000533776 AMPD3Q01432 767 aa3.79□□□□□ -1.8
BRCA2-205ENST00000533776 E2F2Q14209 437 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms