RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 MYL6P60660 151 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 WDR72Q3MJ13 1102 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 MDH1BQ5I0G3 518 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 SCARA5Q6ZMJ2 495 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 KRBA2Q6ZNG9 492 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 C4orf50Q6ZRC1 276 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 DPH6Q7L8W6 267 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 C1orf210Q8IVY1 113 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 MAB21L3Q8N8X9 362 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 SPATA18Q8TC71 538 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 PLEKHO2Q8TD55 490 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 ZNF516Q92618 1163 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 MRPS31Q92665 395 aaKnown RBP11.17□□□□□ -0.62
CAPN1-225ENST00000533704 NKD2Q969F2 451 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-225ENST00000533704 ELMO3Q96BJ8 720 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 PKMYT1Q99640 499 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 MKNK1Q9BUB5 465 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 SLC46A2Q9BY10 475 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 TRPC7Q9HCX4 862 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 ABCB6Q9NP58 842 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 DLGAP2Q9P1A6 1054 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 MAGEC2Q9UBF1 373 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-225ENST00000533704 CDH9Q9ULB4 789 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 MAPK8IP1Q9UQF2 711 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 R4GN57 208 aa11.17□□□□□ -0.62
CAPN1-225ENST00000533704 A0A1W2PQ27 194 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 A0A1W2PQ64 194 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 A0A1W2PQD8 194 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 GOLGA6L4A6NEF3 574 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 LRRIQ3A6PVS8 624 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-225ENST00000533704 MAN2B1O00754 1011 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 CHADO15335 359 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 LAMTOR5O43504 91 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 CALUO43852 315 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-225ENST00000533704 MYL1P05976 194 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 WARSP23381 471 aaKnown RBP11.16□□□□□ -0.62
CAPN1-225ENST00000533704 BDNFP23560 247 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 GNL1P36915 607 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-225ENST00000533704 AVPR1AP37288 418 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 GRIK1P39086 918 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 NBL1P41271 181 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 SOX9P48436 509 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 ZNF699Q32M78 642 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 TXNDC8Q6A555 127 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 ASCL5Q7RTU5 278 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 BPIFB1Q8TDL5 484 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 FAM3CQ92520 227 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 SYAP1Q96A49 352 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-225ENST00000533704 LRRC3BQ96PB8 259 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 NELL2Q99435 816 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 OSBPL6Q9BZF3 934 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 GZF1Q9H116 711 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-225ENST00000533704 KCTD10Q9H3F6 313 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 CRTAC1Q9NQ79 661 aa11.16□□□□□ -0.62
CAPN1-225ENST00000533704 MYO16Q9Y6X6 1858 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 FAM237AA0A1B0GTK4 181 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 PRR23AA6NEV1 266 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 A8MXQ7 604 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 PDXKO00764 312 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 NOL4O94818 638 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 ZNF202O95125 648 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 F11P03951 625 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 SP9P0CG40 484 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 CCNE1P24864 410 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 ANXA13P27216 316 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 RAP1GAPP47736 663 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 DLG4P78352 724 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 CSTF1Q05048 431 aaKnown RBP11.15□□□□□ -0.62
CAPN1-225ENST00000533704 DPYDQ12882 1025 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 NCOA4Q13772 614 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 MAPRE1Q15691 268 aaKnown RBP11.15□□□□□ -0.62
CAPN1-225ENST00000533704 CFAP221Q4G0U5 840 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 ARHGAP29Q52LW3 1261 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 ZNF667Q5HYK9 610 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 TDRD10Q5VZ19 366 aaKnown RBP11.15□□□□□ -0.62
CAPN1-225ENST00000533704 FAM171BQ6P995 826 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 TMEM150AQ86TG1 271 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 CMTM8Q8IZV2 173 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 CELF5Q8N6W0 485 aaKnown RBP11.15□□□□□ -0.62
CAPN1-225ENST00000533704 PARD3BQ8TEW8 1205 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 CCDC34Q96HJ3 373 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 FUBP3Q96I24 572 aaKnown RBP eCLIP11.15□□□□□ -0.62
CAPN1-225ENST00000533704 DPEP3Q9H4B8 488 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 SMYD3Q9H7B4 428 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 MMRN2Q9H8L6 949 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.15□□□□□ -0.62
CAPN1-225ENST00000533704 DMAC2Q9NW81 257 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 THG1LQ9NWX6 298 aaKnown RBP11.15□□□□□ -0.62
CAPN1-225ENST00000533704 GTSE1Q9NYZ3 720 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 UXTQ9UBK9 157 aaPredicted RBP11.15□□□□□ -0.62
CAPN1-225ENST00000533704 FRMD4BQ9Y2L6 1034 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 NME7Q9Y5B8 376 aa11.15□□□□□ -0.62
CAPN1-225ENST00000533704 EP300Q09472 2414 aaPredicted RBP11.15□□□□□ -0.63
CAPN1-225ENST00000533704 MYOFQ9NZM1 2061 aa11.14□□□□□ -0.63
CAPN1-225ENST00000533704 PROB1E7EW31 1015 aa11.14□□□□□ -0.63
CAPN1-225ENST00000533704 TACC1O75410 805 aa11.14□□□□□ -0.63
CAPN1-225ENST00000533704 RHOBTB3O94955 611 aa11.14□□□□□ -0.63
CAPN1-225ENST00000533704 KIF20AO95235 890 aa11.14□□□□□ -0.63
CAPN1-225ENST00000533704 PTPN1P18031 435 aaKnown RBP11.14□□□□□ -0.63
CAPN1-225ENST00000533704 NR2F2P24468 414 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms